Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00325 ATGGCATCTGGTGAAGGTGACACTCTGGGAACTATGGAAAATTGTGTAGAAGATTCTTCAATACCAGAGTCGCAATTGTCTGATGAGCATCATCATCATCACAAACACGGTAGCAATGGAGATCTTCCGATGGAAAATGGTATATTCGACGGCGATCAAGGTCCAGCTGATAGTTATGATCAGCTTCTAGAAATGGTTGCTGACCTCAGATTTCAGAATGAATTCTTGAAGTCCCAGTTTGATGGATTTCGAAATGTAAACCATATACATAGTGACTCTAGTCTGCAGAAAGGAGTTGGTGGTCCAGAAGGTGAGGAATCTGACATTGTGAAAGAGCTTCAGAAAAGGATACAAGCACTAGATAAAGAACTTCTGGTAGAAAAACAAACAAGACTTGCATCTGAAGAGGCTTTGAAGCACCTTCAAACGGTATACTCAGAGGCAGAAGCAAAGGCCAGGGAGCTGTCTGAAAAGCTCGCAGAAGCTCAAACAAAGCTGGAGCAAGAAATAAAAGATCGTGAAGAGAAGTACTCTGAACTCGACTCAAAGTTTAACAGGCTTCATAAACGAGCAAAGCAGCGTATTCAAGATGTTCAAAAGGAAAAAGATGATCTTGAGGCTCGATTCAATGAAGTGATTGAGACTGCTGAGAAAGCAACATCCCAACGGTCAGCATTACAACAAGAGCTAGAACGCACGAGGAAGCAAGCAAATGATGCATTGAAAGGAATGGATGCTGATAGGCAACATCTAAGAGGTGAAAACAACAGACTTCGAGATACTATTGAGGATTTACGGCGTTCTTTACAACCTAAAGAGAGTGCTATTGAATCATTGCAACAATCTCTTGCAGAAAAAGAACAGATGTTAGAAGATATGAGAGGTTTGCTTCAGGCTGCTGATGAAAAAAAACAAGCTGCACTCGCGGAGCTCTCAGCTAAACACCAAAAGAATATAGAAAGTTTGGAGGCTCAACTTAATGATGCATTGTCCGATAGAAGCAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCTAAAATTGCAGAGATGGAGGCAGCCTCATCTGGGGAGGCAGCACGACTTAGAGCATCTCTGGAAAGTATGAAGGGGGAGCTTTCTCACCTAAAACAAGAGCATGAGAAAGCAAGAGCAAGCTGGGAGACTGCATCTCAGGCGCTCAAAATGAAACTTGAAACCGCTGAGAGCAACTGCATACGCGCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTGGAATCGGAGGTCGCTGCTCAGACCAGGATTCTCAGTATGAGAGATGCTGAACTTTTGGCTGCCAAGGAAGAGATAAGCAGTCTTGAGAGGGAATTTTCTTCATACAAAGTTCGAGCACATGCACTTCTTCAAAAGAAGGATGCAGAACTGGCTGCAGCTAAAGACTCTGAACAACTCAAAGCTCTTGAGGAAGCCCTAAAGGAGGCTGAAAATGAAGTATTATCGGTAACAGAAGAAAAGGATAAAGTTATTCAAGATCTTCAGTCTGCTATGGCAAATCATGAGAGAGAGCTTGTAGAAAGAGAGACAGCCCTTGAAAATGCCAAGCAACTAATAAGGAGCTTAGAAACAAAGCTTGACTCAGCTAATGCTCAGCACCTTAAGGAGAAAGAAGAATGGGGACTAAGCCTTAAAAATGTAGAAGAAACGTGGCGAATCAAATGTGACTCAATGAAGGCTGAAAACGAAGCAACTGCTGCACAAGATATGCAAAAGGAGTTGCAAGAGCTCAAACTGCAATATAAAAAATTGAAGGATGAACATGCTTCTTTTCATGATATTGCTGATAAAATGATTGAGGAGAAGGATAATGAAATATCTAGACTTTCAGATGATAACAGGAATCTTCGTCAATCTCTTCAATCAAGACCACAGGTTGACCACAGTGACAATGATAATTATAGCACAGCCTCGCATAAAGTGGATTCAATGAATTTAAGTCCCTCTGCTGCAGAACAGCAAATTCTGCTCCTAGCTAGACAACAAGCTCAAAGAGAAGAAGAACTAGCACGATCACAGCGCCATATCTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGAGAGAATCGTCTCCACAGCCAACAGGAAGCAATACTAAAGGCTGAGCTTCGTGACATGGAAAGATCAAAGAAAAGGGAAGGTGTAGATATGACATATTTGAAAAATGTTATCTTAAAGCTTCTTGAGACAGGTGAAGTGGAGGTATTGCTACCAGTTATTGGGATGCTTCTCCAGTTTAGTCCACAAGAGATGCAGAAGTGCCAACAGGCATATCAAAACTCAGCAGATGCATCGCCAAATCCTGCGAATGATGCCTCAGGATCTGGCCTCTCTCTTTTCTCAAGATTCTCATTTACATAA 2418 0.4185 MASGEGDTLGTMENCVEDSSIPESQLSDEHHHHHKHGSNGDLPMENGIFDGDQGPADSYDQLLEMVADLRFQNEFLKSQFDGFRNVNHIHSDSSLQKGVGGPEGEESDIVKELQKRIQALDKELLVEKQTRLASEEALKHLQTVYSEAEAKARELSEKLAEAQTKLEQEIKDREEKYSELDSKFNRLHKRAKQRIQDVQKEKDDLEARFNEVIETAEKATSQRSALQQELERTRKQANDALKGMDADRQHLRGENNRLRDTIEDLRRSLQPKESAIESLQQSLAEKEQMLEDMRGLLQAADEKKQAALAELSAKHQKNIESLEAQLNDALSDRSKATESISSLQVLVAEKESKIAEMEAASSGEAARLRASLESMKGELSHLKQEHEKARASWETASQALKMKLETAESNCIRAEVEVAKIRSQLESEVAAQTRILSMRDAELLAAKEEISSLEREFSSYKVRAHALLQKKDAELAAAKDSEQLKALEEALKEAENEVLSVTEEKDKVIQDLQSAMANHERELVERETALENAKQLIRSLETKLDSANAQHLKEKEEWGLSLKNVEETWRIKCDSMKAENEATAAQDMQKELQELKLQYKKLKDEHASFHDIADKMIEEKDNEISRLSDDNRNLRQSLQSRPQVDHSDNDNYSTASHKVDSMNLSPSAAEQQILLLARQQAQREEELARSQRHILALQEEIEELERENRLHSQQEAILKAELRDMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPQEMQKCQQAYQNSADASPNPANDASGSGLSLFSRFSFT 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00325 805 Coils Coil 138 183 - -
Aip05g00325 805 Coils Coil 687 721 - -
Aip05g00325 805 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 63 776 - -
Aip05g00325 805 Coils Coil 575 612 - -
Aip05g00325 805 Coils Coil 110 130 - -
Aip05g00325 805 ProSiteProfiles GRIP domain profile. 729 776 IPR000237 -
Aip05g00325 805 Pfam GRIP domain 733 772 IPR000237 -
Aip05g00325 805 Coils Coil 617 637 - -
Aip05g00325 805 Coils Coil 365 392 - -
Aip05g00325 805 MobiDBLite consensus disorder prediction 1 55 - -
Aip05g00325 805 Coils Coil 397 424 - -
Aip05g00325 805 Coils Coil 188 268 - -
Aip05g00325 805 Coils Coil 470 557 - -
Aip05g00325 805 Coils Coil 276 360 - -
Aip05g00325 805 MobiDBLite consensus disorder prediction 637 663 - -
Aip05g00325 805 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 63 776 - -
Aip05g00325 805 SMART 1grip 732 776 IPR000237 -
Aip05g00325 805 Coils Coil 436 463 - -
Aip05g00325 805 Gene3D - 228 400 - -
Aip05g00325 805 MobiDBLite consensus disorder prediction 23 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00325 Aip-Chr5 3646782 3656435 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00325 - - aip:107642516 1430.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00325 05 3646782 3656435 Aip05g00325 05 3646782 3656435 ECH