Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00321 ATGAAGAAGGAGAAAGAGAAGGCAAGAAACGAAAGAAAAGAAAAAGAAGAGGAAGAGGAAGAAGAAGGTGCAGCAAGAAGAAGAAGGAGGAGGACTACTGGCGCTCGAAATGAAAGGGACAACTTAGCTTTGCGCGGAAACGTTTTCGGAGCTCTAATGGCGGTTCCGCTCAGAATGAGCAACAACAATAAGCGTGCTGTGCTTGCTCGTTTGAAATCCCTCATCAACACACAGCAGTTGCAGAGGTTCTGCACTTCTATGCAGCCCAAAGGGAAACTGGATGATCGCTTGTCTCCAAAAGGGGACTTAGATTACTCGGCTCTGAAAGAACGCAATGACTTCTTGAAATGGAAGACTCTGGACGCTAGTAAGCTTGGTATAACCACTTCTAAGCTTTCGTATCCATCTCAGATTGTCTTGAAACATCTTAGCCGCAAAGGATTTAAGTCCTATTTGGTAGGTGGGTGTGTGAGAGATCTACTATTGAATAGAACTCCAAAAGATTTTGATGTCATCACCACAGGGGAGCTTAATGAGGTGAAAAAGCATTGCCGTACAATAGGCCATTCTATAATTGTAGGGCGACGTTTTCCAGTATGCCTTGTTAATGTAAAAGGTTCTCAAATAGAGGTAACCAGTTTTGCGACAGAGGCACAGACATTTGAAGGGAGTGACCAAGTTCGACGCACTCTATTGCCCAAATCCAAATGCAATAATAAAGAAGACTTAATTCGCTGCAAAAACTCCTTGTACAGAGACTTCACAATTAATAGTTTATTTTATGACCCCTCTGCTGATAAGATATACGATTATGCCAATGGAATCGCTGATTTGAGGTCCTTGAAGCTTGAAACCGTGATCCCTGCTCAACTGTCCTTCAAAGAGGACCCTGGTAGAATTTTGCGTGGCTTCAGAATGGCAGCTCGGCTAGGTTTATCATTATCAAGGGAGATTGAGGCTGCTATTTTGGCTTATTCTTCACGAGTTAAGAACATGAACAAGGTAACTCAATTGAAATTTTATGATGGTATGCTTCCTGAATGGGTGACCACCAAGCGAGAATATACTTTGCTAACTTTTTGTATCCATATATCATGCATGCCTGTGCCTGGTACCACTTTTCTTCTTTCACCTCTTGCAGTTCTGTTACTTTTGCAGAAATTATTCTTCCATCTGGATAATTTGGTGACATGTGATCGGCCTTCTGATTGCACTCTATGGATTGGGTTGCTAGCATTTCACCTAGCATTAGTAAATAACCCGCAAGAAGCCCTTGTGGTGTGGGCTCTTGCTTCTATTCTATATCATGGGAATTGGAAAGACGGTGTTAAATTCGCTAAAGAACATGCAGCAGTGGCTGTTAATTTTGCACCTGAAATAAGGATGTCCTGTTTGAACAAATCAGAAGAAGAAATTGCAAAAGCAGTCACTGAATTGGCATCTCATGTGATACACTCTGTATGTGTGCTGGTTAATAATGATAGTCTTCGTCAATCCATGGCTAGATACCCATCTTCTCCATGCTCTGGCACTGTATTTGTATCAGGGAAAAAAGGGCAGATTGTTGGTGATATTTTCAGAGTGCTAGTCAATGATGTCCAACTTTATAGGAGTAAAAGAAAAGGTTCAAAGATAAAATATGGCATGCTTAGCCAGGGCAGTATTGAAGAGATTAGATATGTTTTGGGCAAAATTGTTCTCAACACTATGATTAGTTGCATTGTTGAGAACAAGGATGATTTTGAGGCTGAAAAATGTCATCTTAAGACTGAGGACACTGAGGAAAGTGGCCAGTCACAAATTTCAAATTCAGTAATCCATAAATCGGTTGCAAGGAAACATGAAAGACAAGCTTTATCACCAAGTCCAGAAAGTAAGCAAGGAAAAATCAAGAAACAGAAACTGGTTGACAATGATCGTGTTCCAGAGCAGAAAGTGGACGTGGCGAGCCATGAATTGGTTTTCAAGGAAACCAGTCAAGAGGGGCAGAAGCAAGCAAAATTAACTCAGAAGGTTGATCCATCTATGATGAAGGGCTTTGTGCCGAAAATGAAAAAACATCCAATAAAGCATCCAGCGAGGCGTATGAAGACGGTCAAACAGAACTCACACACACCATCACAATTTAAAGTGTCTAAGAATCATCGTGAAGTAGCTGACAGCTGCAACATAAATGTGGATGCAAAAGTTTTGAAGAAAAGGTCCCAATCATCATCTGATGAAAAAGTTTTGAAGCATTCCCTCTCCAGTCTCTTCAGAAAATGA 2265 0.411 MKKEKEKARNERKEKEEEEEEEGAARRRRRRTTGARNERDNLALRGNVFGALMAVPLRMSNNNKRAVLARLKSLINTQQLQRFCTSMQPKGKLDDRLSPKGDLDYSALKERNDFLKWKTLDASKLGITTSKLSYPSQIVLKHLSRKGFKSYLVGGCVRDLLLNRTPKDFDVITTGELNEVKKHCRTIGHSIIVGRRFPVCLVNVKGSQIEVTSFATEAQTFEGSDQVRRTLLPKSKCNNKEDLIRCKNSLYRDFTINSLFYDPSADKIYDYANGIADLRSLKLETVIPAQLSFKEDPGRILRGFRMAARLGLSLSREIEAAILAYSSRVKNMNKVTQLKFYDGMLPEWVTTKREYTLLTFCIHISCMPVPGTTFLLSPLAVLLLLQKLFFHLDNLVTCDRPSDCTLWIGLLAFHLALVNNPQEALVVWALASILYHGNWKDGVKFAKEHAAVAVNFAPEIRMSCLNKSEEEIAKAVTELASHVIHSVCVLVNNDSLRQSMARYPSSPCSGTVFVSGKKGQIVGDIFRVLVNDVQLYRSKRKGSKIKYGMLSQGSIEEIRYVLGKIVLNTMISCIVENKDDFEAEKCHLKTEDTEESGQSQISNSVIHKSVARKHERQALSPSPESKQGKIKKQKLVDNDRVPEQKVDVASHELVFKETSQEGQKQAKLTQKVDPSMMKGFVPKMKKHPIKHPARRMKTVKQNSHTPSQFKVSKNHREVADSCNINVDAKVLKKRSQSSSDEKVLKHSLSSLFRK 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00321 754 Gene3D Beta Polymerase, domain 2 117 280 IPR043519 -
Aip05g00321 754 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 62 753 - -
Aip05g00321 754 MobiDBLite consensus disorder prediction 591 641 - -
Aip05g00321 754 MobiDBLite consensus disorder prediction 1 38 - -
Aip05g00321 754 CDD NT_ClassII-CCAase 139 279 IPR002646 GO:0003723|GO:0006396|GO:0016779
Aip05g00321 754 Gene3D - 283 344 - -
Aip05g00321 754 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 62 753 - -
Aip05g00321 754 MobiDBLite consensus disorder prediction 732 754 - -
Aip05g00321 754 SUPERFAMILY Nucleotidyltransferase 137 279 IPR043519 -
Aip05g00321 754 Coils Coil 1 28 - -
Aip05g00321 754 SUPERFAMILY Poly A polymerase C-terminal region-like 283 428 - -
Aip05g00321 754 Pfam Poly A polymerase head domain 151 282 IPR002646 GO:0003723|GO:0006396|GO:0016779
Aip05g00321 754 MobiDBLite consensus disorder prediction 1 39 - -
Aip05g00321 754 MobiDBLite consensus disorder prediction 627 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00321 Aip-Chr5 3625241 3631647 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00321 - - ccaj:109801320 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00321 05 3625241 3631647 Aip05g00321 05 3625241 3631647 ECH