Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00311 ATGATACCATTCTATCTAAGCCCAAACTTGTCGTTTGCTTTGGCACCAAACTGTCGTCAACTTAGCCACCTCGTTTTACGCCGCACGCGGCAAATTGCTTCGACGCGCCGTCGTTCGCGATGGCCGTATCCGAAGCCTCAGCCTACCCTCCCATCGAGCCAACAAACTTCGATCTCATCATCGTTGGCACTGGCCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCCGTCCCCGCACCACCACTACCACCATCTGCCGCCGGATCCGGTGATTCCGATTACGCCGTCGTGGACCTCGTCCACGATCCACTCTACTCCGATATTGAGGTCGAATGGCATGGTTCCGAGGACGAAACCTCGAAGATTCGAGAAGATTCCAGAAAATTCAACATCGATTTGGGAGGACCTAGGGCGCTGTTCTGCGCCGATAGTTGCATCGATCTGTTGCTGAAATCCGGAGCGGCACAGTATCTCGAATTCAAGGGCGTGGATGCGAGCCTCGTGTACGAGCCTAATGGCAGCGGTTTGGCGAACGTGCCGGATTCTCGCGGAGCGATTTTCAGGGACAAGAATCTTTCGCTGAAGGAGAAGAACCAGCTGATGAGGTTCTTCAAGCTCGTGCAGCAGCACCTTGCTGGTGGTGGCGATCAAAGTGAAAGTGGCGGCGACATTCAGAAGATTTCGCAGGAAGATCTGGAGAGTCCATTCGTTAGTTTCCTGGATAAGATGCGGTTGCCGCCAAAGATAAAATCAATTCTTTTGTATGCTATCGCCATGTTAGATTATGACCAAGACAATAATGAGGTTTGCAAAGATTTGCTCAAGACAAAGGATGGTATTGATCGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCTAATGCACCAGGGGCTTTGCTTTATCCTATTTACGGTGAAGGAGAACTACCACAAGCTTTCTGTCGCCGTGCTGCTGTCAAAGGTTGCATTTATGTTCTCAGGATGCCAGTTACTTCTCTGCTTATTGATAAGGTTACTGGGTGTTATAAAGGTGTCAGACTAGTTTCAGGTCAAGATTTATATAGCCATCAGCTAATCATGGATCCGTCATTTGTGATTCCATCACCACTGTCCCCATCTCTAGGCGATTTTCCCAGAGAGAAGATCCAATTATTGAGTCAGAGAGATTTGAAAGGAATGGTGGCCAGGGGGATATGCATCACAAGGAGTTCCATAAAGCCTGATTTATTAAATTGCTCAGTGGTGTATCCCCCTAGATCTTTGTATCCTGAACAAGTGACGTCGGTCAGAGCTCTTCAAATAGGATCAAACCTTGCTGTTTGTCCCGCGGGCACCTTTATTTTATACTTCTCCACTGTGTGCAATGATGCTGATGAAGGAAAGAAGTTATTAAAAGCAGCCATGAATGCTCTTCTTACACCGCCTGTGTCTGTAACCTCTGAAAGTAATCCAATTGTTCAAAGTGATAATGAAGATGTAAAACCCATTGTGCTCTGGAATGCATTTTATATCCAGAAAGTATTCACGGGTAAATTTGACACTATGACCTCCGCTCCAACACCAGATGGAAATCTAAACTATGCTGACATTTTAGATGCGACTGAGAAGCTATTCGGTCAAATGTACCCAGATCAAGCATTCTTTCCAAAGACAGAATCACCTGAAGATACTATGGATGAGAATGGAGTGATTATGGAAAGCTAA 1806 0.4324 MIPFYLSPNLSFALAPNCRQLSHLVLRRTRQIASTRRRSRWPYPKPQPTLPSSQQTSISSSLALACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPAPPLPPSAAGSGDSDYAVVDLVHDPLYSDIEVEWHGSEDETSKIREDSRKFNIDLGGPRALFCADSCIDLLLKSGAAQYLEFKGVDASLVYEPNGSGLANVPDSRGAIFRDKNLSLKEKNQLMRFFKLVQQHLAGGGDQSESGGDIQKISQEDLESPFVSFLDKMRLPPKIKSILLYAIAMLDYDQDNNEVCKDLLKTKDGIDRLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVTSLLIDKVTGCYKGVRLVSGQDLYSHQLIMDPSFVIPSPLSPSLGDFPREKIQLLSQRDLKGMVARGICITRSSIKPDLLNCSVVYPPRSLYPEQVTSVRALQIGSNLAVCPAGTFILYFSTVCNDADEGKKLLKAAMNALLTPPVSVTSESNPIVQSDNEDVKPIVLWNAFYIQKVFTGKFDTMTSAPTPDGNLNYADILDATEKLFGQMYPDQAFFPKTESPEDTMDENGVIMES 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00311 601 PANTHER RAB GDP-DISSOCIATION INHIBITOR 116 590 IPR018203 GO:0005092|GO:0007264
Aip05g00311 601 MobiDBLite consensus disorder prediction 103 123 - -
Aip05g00311 601 Pfam GDP dissociation inhibitor 149 503 IPR018203 GO:0005092|GO:0007264
Aip05g00311 601 PANTHER RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A 116 590 - -
Aip05g00311 601 Gene3D - 333 581 IPR036188 -
Aip05g00311 601 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 212 332 - -
Aip05g00311 601 PRINTS Rab GDI/REP protein family signature 229 244 IPR018203 GO:0005092|GO:0007264
Aip05g00311 601 PRINTS Rab GDI/REP protein family signature 178 194 IPR018203 GO:0005092|GO:0007264
Aip05g00311 601 PRINTS Rab GDI/REP protein family signature 339 360 IPR018203 GO:0005092|GO:0007264
Aip05g00311 601 MobiDBLite consensus disorder prediction 36 55 - -
Aip05g00311 601 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 139 541 - -
Aip05g00311 601 SUPERFAMILY FAD-linked reductases, C-terminal domain 425 539 - -
Aip05g00311 601 SUPERFAMILY FAD/NAD(P)-binding domain 145 409 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00311 Aip-Chr5 3518870 3524756 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00311 K23460 - gmx:100795946 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00311 05 3518870 3524756 Aip05g00311 05 3518870 3524756 ECH