Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00286 ATGGTCCCAAAACCCATCATTGTAACTACACCACCCTCATCATCACCCTCAATAACCCCACCTCTCCCTCTCAGAAACATCTCCACCGTTCAAACCCAACAAAACCCCCCACAAACCCTTAACACCACCACCACTACCGCACCACCACCGCCACAACCAACAATAATAACTACCCCTCCCTCCAGAACAACCAAACCATCACCCTCAAAACTCCCCCCTAGAAGAAGAGCTTCCGAGTTGTCGCTGCCAGGGTTCATCTTCAACGCATTCGATGACGTCATCAACAACTTCATCGACCCTCCATTGAAGCCTTCAGTGGACCCAAAACACGTCCTCTCTCACAACTTCGCACCGGTAGACGAGCTTCCACCAACTCAATGCGACATAGTCGAGGGCTCTCTTCCGCCCTGCCTGGACGGCGCGTACATCAGAAACGGTCCCAACCCACAGTTTCTCCCGAAGGGACCGTACCACCTCTTCGACGGCGACGGCATGCTCCACGCCATTCGCATCAAAGAAGGCAAAGCCACACTCTGCAGCCGCTACGTCAAGACCTACAAGTACACCATAGAGAACGAAGCAGGTCAACCTCTCATCCCCAACGTGTTCTCCGGCTTCAACACACTAATGGGCTCGGCGGCGCGTGGCTCCCTCACGGCGGCGCGTGTGCTGAGTGGACAGTACAACCCTGTGAACGGCATTGGGCTGGCGAACACAAGCTTAGCTCTGTTCGGCAACCACCTCTTCGCTCTCGGAGAATCGGATCTTCCGTACAAGGTGAGAGTGACGGAGACTGGCGACATCGAAACGGTGGGTCGTTTTGACTTCGAGGGGAAGCTGGCGATGAGCATGACAGCGCACCCGAAGATTGACAGCGAGACCGGAGAGACGTTTGCGTTCCGTTACAGTCCGATTCCGCCGTTTCTGACGTACTTCTGGTTCGATAAGGAAGGGAGGAAGCAGGCGGACGTGCCGGTATTCTCAATGACGAGGCCGGCGTTCCTGCATGATTTTGCGGTGACGAAGAAGTATGCGTTGTTTGCGGACATACAGATTGGGATGAACCCGCTTGACATGATCTCCGGTGGGTCTCCGGTGGGGTCGGATCCGTCGAAGGTGTCGAGGGTGGGGATATTGCCTCGCTATGCGGTTGACGAGTCTCAGATCAGGTGGTTGGATGTGCCGGGATTCAACCTCATCCACGCCATCAACGCATGGGACGAACCTGACGGAGAAACCATCACCCTCGTGGCCCCCAACATTCTCTCCGTCGAGCACACCCTCGAGAGAATGGACCTCGTCCACGCCATGGTTGAAAAGCTCACCATCCATCTCCCCACCGGCATCGTCTCCCGCCAGCCCTTATCCTCTCGCAACCTCGACTTCGCCGTCATCAACCCTTCCTACGTCGGAAAAAAGAACAACTTCGTCTACGCCGCCGTCGGCGACCCCATGCCCAAGATCTCCGGTGTCGTCAAGCTCGACGTCTCCAGGAAGACCAACTGCACTGTCGCCTGCCGGATGTTTGGCGACGGATGCTACGCCGGCGAGCCCTTCTTTGTGGCCAGGGATCCGGAGAACCCTGAGGCGGAGGAGGACGACGGGTACGTGGTGACCTACGTGCACGATGAAAGGAAGGGAGAGTCGAGGTTCTTGGTGATGGATGCAAAGTCACCGGAGCTGGAGGTGGTGGCGGCGGTGAGGCTTCCTCGTCGGGTGCCTTACGGGTTTCACGGGCTGTTCGTGAGGGACACTGACATAAGGAAAGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTACATCATAAAAAATTTAAACGGTTAA 1974 0.5132 MVPKPIIVTTPPSSSPSITPPLPLRNISTVQTQQNPPQTLNTTTTTAPPPPQPTIITTPPSRTTKPSPSKLPPRRRASELSLPGFIFNAFDDVINNFIDPPLKPSVDPKHVLSHNFAPVDELPPTQCDIVEGSLPPCLDGAYIRNGPNPQFLPKGPYHLFDGDGMLHAIRIKEGKATLCSRYVKTYKYTIENEAGQPLIPNVFSGFNTLMGSAARGSLTAARVLSGQYNPVNGIGLANTSLALFGNHLFALGESDLPYKVRVTETGDIETVGRFDFEGKLAMSMTAHPKIDSETGETFAFRYSPIPPFLTYFWFDKEGRKQADVPVFSMTRPAFLHDFAVTKKYALFADIQIGMNPLDMISGGSPVGSDPSKVSRVGILPRYAVDESQIRWLDVPGFNLIHAINAWDEPDGETITLVAPNILSVEHTLERMDLVHAMVEKLTIHLPTGIVSRQPLSSRNLDFAVINPSYVGKKNNFVYAAVGDPMPKISGVVKLDVSRKTNCTVACRMFGDGCYAGEPFFVARDPENPEAEEDDGYVVTYVHDERKGESRFLVMDAKSPELEVVAAVRLPRRVPYGFHGLFVRDTDIRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFYIIKNLNG 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00286 657 MobiDBLite consensus disorder prediction 1 19 - -
Aip05g00286 657 PANTHER BETA-CAROTENE DIOXYGENASE 23 589 IPR004294 GO:0016702
Aip05g00286 657 MobiDBLite consensus disorder prediction 20 42 - -
Aip05g00286 657 MobiDBLite consensus disorder prediction 43 57 - -
Aip05g00286 657 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 23 589 - -
Aip05g00286 657 Coils Coil 587 590 - -
Aip05g00286 657 Pfam Retinal pigment epithelial membrane protein 118 582 IPR004294 GO:0016702
Aip05g00286 657 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00286 Aip-Chr5 3104178 3107077 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00286 K09840 - twl:120016039 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00286 05 3104178 3107077 Aip05g00286 05 3104178 3107077 ECH