Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00270 ATGGGGCTTCTGGATCTTTTCTATGTTGCTTCTTTGCCAGTCATCAAAGTTTTGTTAATCACTGCAGTTGGATTGTTTCTTGCTCTTGAAAATGTCAACTTGTTAGGAAAAGATGCAAGGATTCAAGTCAATCATCTTGTGCATTATGTGTTCAATCCTGCACTGGTTGGAGGAAATTTGGCAGATACTATAACATTTGAGAATTTTGTTACACTGTGGTTTATGCCAGTGAACATTCTCATTACATTTATAATAGGGTCAATTTTGGGATGGATCCTAGTCAAAATCACAAGGGCTCCCAAAAACCTAGAAGGTTTGATAATTGGTGTCTGTTCTGCAGGAAACTTAGGAAACTTGCCTATAATCATTATCCCAGCTATATGCAAAGATAAAGGTAGCCCTTTTGGAGATCCTGATGTCTGCTACAAATATGGGATGGCATATGCTTCACTATCTATGGCTATTGGAGCAGTTTATATATGGAGTTATGTTTATAACATAATGAGGGTTTCAGCAAGTAAATTCCACAGAGAAAGTACTGCAAGCATTCATTCCATTCATTCTATCCATGCTTCAGGGGAGTTATTAGGGCCGTTCCCTGACGAATGCTCGCCAGAGTCCCCGTCCAAGTATCCGGCGAAAGAGGATGATTCATACAGCCAACTACTTTCTTCCACAGAAGCTGGAGAAAAATCTAAGGTATCAATGACAGATAAAATAAAGCAAAAATTCAAAGCAATTTTCTTCAACTCAAATATCAAAGCCGTATTTTCGCCTGCAACTCTTGGAGCGATTGTTGGATTCATTGTTGGTGTAATTTCCCCGCTACGTAATCTCCTGATTGGAAGCAATGCTCCACTTCATGTGGTTGAAGATTCTGTTACTATGGTGGGTGAAGCAGCAATTCCAACCATCACCCTTATTATGGGTGCAAACCTCCTTAAAGGGTTGAAGGGAGCAAGAACTCCATTTTGGACAGTCATAGGAATTTTGGTAGTGAGATACATTTTGCTGCCAATTTTGGGTGTTCTTATTGTTAAATGGGCTACACAATTGGGTTTGGTGCCTGCAGATCCCTTATATCAGTTTATGCTGCTTCTTCAATATGCACTTCCACCAGCTATGGCTATAGCAACCATAGCACAGTTGTTCGGAGCTGGTGAAAGTGAATGTTCAATTATCATGTTATGGACATATATTTTGGCTTCAGTTGCAGTGACACTTTGGTCAACCTATTTCATGTGGCTTGTCGCTTAA 1257 0.3994 MGLLDLFYVASLPVIKVLLITAVGLFLALENVNLLGKDARIQVNHLVHYVFNPALVGGNLADTITFENFVTLWFMPVNILITFIIGSILGWILVKITRAPKNLEGLIIGVCSAGNLGNLPIIIIPAICKDKGSPFGDPDVCYKYGMAYASLSMAIGAVYIWSYVYNIMRVSASKFHRESTASIHSIHSIHASGELLGPFPDECSPESPSKYPAKEDDSYSQLLSSTEAGEKSKVSMTDKIKQKFKAIFFNSNIKAVFSPATLGAIVGFIVGVISPLRNLLIGSNAPLHVVEDSVTMVGEAAIPTITLIMGANLLKGLKGARTPFWTVIGILVVRYILLPILGVLIVKWATQLGLVPADPLYQFMLLLQYALPPAMAIATIAQLFGAGESECSIIMLWTYILASVAVTLWSTYFMWLVA 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00270 418 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 418 - -
Aip05g00270 418 PANTHER - 1 418 IPR045033 GO:0080162
Aip05g00270 418 Pfam Membrane transport protein 12 409 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00270 Aip-Chr5 3002604 3006148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00270 K24139 - gmx:100791609 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00270 05 3002604 3006148 Aip05g00270 05 3002604 3006148 ECH
Aip05g00270 05 3002604 3006148 Aip10g00064 10 616558 619126 PCT