Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00266 ATGCAGATGAGTTTTGTCCTTAAAAAGGATCGGAAAACTATATGCAGTGTCAAGTCCACAAACCCGCCTACTGAACTGTCCAATGAGTTGAACATACATACAATGAGACATATGAAAGTATCAGGAATTTCCATGTTGCCCCAGTTTTCATTGTACCCTGCCCCAGAAAATTCGCATGAAAAGCACGAGTGGAGAAGGTTCTTGGATTTCCTGCACAAGTATGACATGATTGCTATTGCAGACTTTGAGCCATACAAGTTCTACATTCTGCCCCCTGCTAAAGCCTCGACATCTACCCCAGTTACTGTTGCCTATCAGATAGGCAAGACATGCGTTGTGGATAGTAGACCACGGGATTGCGAATCAGGCCCAGCAAATGGTGCAGAAGTTTGTTCCTCTGATCCTAACTTCCCTCAAACTGATGATTGTGCCAACCATTCTATGAGTGAAACTTGTGATGAATTGAAAAGTAAAACTCATATGAATCAGGATAGACTCTTCGAGAAAAATTACATACGAGCAGACCCAAGTTACCTAAAAACTCTTGGTCAAGCTCATTCTGGATGGATTTTTGGTGGGATAGCTGAGCTTGTTGATAATTCAAGGGATGCCAAAGCCTCCAAGTTGGATATTTTTGTAGAGATGATCAAGTTGAAGAAATCTGGGAAGAATGTTCCTATGTTGTCAATTATTGATAATGGTCAAGGGATGAACCATGATGAGATTGTGAAAATGGTATCGTTTGGGCATAAACAGCCTGATAAAGATGTCAAGGATCACATTGGCAGATTTGGCATCGGATTCAAGACAGGAGCAATGAGGCTTGGGAGGGATGTTCTTGTTCTAACCCAGACTGCTAACTCCAGATCTTTAGCGTTTCTTTCACAATCTTTGAATGAAGGCAAAGATAATATTGAGATTCCAATAGTTAGTTACTGTCGGCAAGGACAACAGGTGGAAATTGACACAGCTGTTCAGTCTGAAGCTTTGGCAAAAAACAATTTGAAAGCTATTAAGGACTTTTCACCATTTGACAAGTATCTAATTGGGGAGAAGGCAGCCTTGTTTTGTGGTGCTACAGGAACACAGATCTACATATGGAACCTAGATGAATGGGGGTCAGGTTATTGTCTAGAATGGCATGATGGACTGTATGGTGGGAGTTCTTTCCACCAAGGCGACATTTTTGTCCGCTCTAGAAGGATTCGTTCTCGTCAAGGCCAAGTTAGTGTGAAGGTTCCACTAGATTTTTCGCTACGAGCTTATTTAGAAGTCATATTCTTAGTTCCACGAATGAAGATGTTTGTTCAAGGAACACTGGTTAAAAGTCGACCACTAGCAAAATTTCTAACAAAAACTGTTGTGGAATCTGGTGACATCTTGGGAAATCCTGTTGAATTAACTCTGGGATATAGTGAATTAGAATGGGAGCAGGGAAACTGTGGAATATTTTTGTACTGGCATGGTCGTTTAATTGAGGCTTACAAGAGAGTTGGTGGTATGATCCATAGTGCAGATGTAGGGCGGGGTATAATTGGTGTCATAGATGTGACCAATATAATGGATGATAAGGATGGCCGTGTTTGGGTGCATAACAACAAGCAGGGATTTCAAGACTCTGAGTCATATGCGCTACTTGAGGAGTGGCTTGCGAAAAAAGTAGATGAATACTGGGACAAAAATTTTGATTCACTTAAGTTGCATAAAGATAATCGTATCTACAAACCTGATTCCGAATGGGTGCAATGTGACAAGTGCAGAAAGTGGAGAATGTTACCTCATAACTATGACGTCGAAAAATTACCTATGCAATGGTTCTGCTATATGCAGCCTTTTGGGGGTCAATGTTCAGATGAAGAACAAAAGATGGCACCTGGCACAGTTAATCTTTCCGATAAGCGTTCAGGATATGACTGCAAGCATAAAGATTCTGATAGGATAAAGGTGGAAGGTGTTATGAATGCCTCTGGTAAAGATGAGAGAAGGGTGAGCTTCCAGATTGAGGAGACCAAACCTCAGGTGTTAAAGAGGTTGAGAAGAGGACCTCCATCTCCGAATCATGAGAATGCAAAGTCTAGATCACCTTCCTCAACAAAGCTGTATGATGAACATACAGCTGAGAAGAGGGTGAGGTTTGAAATTGAAAAGACCAAACCTTCGGCCTTACAGAGGTTGAGAAGAGGACCTCCTCCATCTCCAAATCATGAGAATTCAAAGTCTAGATCACCTTCCTCAACAAAGCTGTATGATGAACATACAGCTGAGAAGAGGGTGAGGTTTAAAATTGAAAAGACCAAACCTTCGGCCTTCCAGAGGTTGGGAAGAGGACCTTCATCTCCAAATCATGAGAATTCAAAGTCTAGATCACCTTCCTCAACAAAGCCGGGAAAGGTGCACCCACTCAGATAG 2409 0.4176 MQMSFVLKKDRKTICSVKSTNPPTELSNELNIHTMRHMKVSGISMLPQFSLYPAPENSHEKHEWRRFLDFLHKYDMIAIADFEPYKFYILPPAKASTSTPVTVAYQIGKTCVVDSRPRDCESGPANGAEVCSSDPNFPQTDDCANHSMSETCDELKSKTHMNQDRLFEKNYIRADPSYLKTLGQAHSGWIFGGIAELVDNSRDAKASKLDIFVEMIKLKKSGKNVPMLSIIDNGQGMNHDEIVKMVSFGHKQPDKDVKDHIGRFGIGFKTGAMRLGRDVLVLTQTANSRSLAFLSQSLNEGKDNIEIPIVSYCRQGQQVEIDTAVQSEALAKNNLKAIKDFSPFDKYLIGEKAALFCGATGTQIYIWNLDEWGSGYCLEWHDGLYGGSSFHQGDIFVRSRRIRSRQGQVSVKVPLDFSLRAYLEVIFLVPRMKMFVQGTLVKSRPLAKFLTKTVVESGDILGNPVELTLGYSELEWEQGNCGIFLYWHGRLIEAYKRVGGMIHSADVGRGIIGVIDVTNIMDDKDGRVWVHNNKQGFQDSESYALLEEWLAKKVDEYWDKNFDSLKLHKDNRIYKPDSEWVQCDKCRKWRMLPHNYDVEKLPMQWFCYMQPFGGQCSDEEQKMAPGTVNLSDKRSGYDCKHKDSDRIKVEGVMNASGKDERRVSFQIEETKPQVLKRLRRGPPSPNHENAKSRSPSSTKLYDEHTAEKRVRFEIEKTKPSALQRLRRGPPPSPNHENSKSRSPSSTKLYDEHTAEKRVRFKIEKTKPSAFQRLGRGPSSPNHENSKSRSPSSTKPGKVHPLR 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00266 802 MobiDBLite consensus disorder prediction 654 802 - -
Aip05g00266 802 PANTHER OS06G0622000 PROTEIN 4 683 - -
Aip05g00266 802 Pfam Morc6 ribosomal protein S5 domain 2-like 417 558 IPR041006 -
Aip05g00266 802 ProSiteProfiles Zinc finger CW-type profile. 574 624 IPR011124 GO:0008270
Aip05g00266 802 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 4 683 IPR045261 GO:0016887
Aip05g00266 802 MobiDBLite consensus disorder prediction 654 686 - -
Aip05g00266 802 MobiDBLite consensus disorder prediction 745 768 - -
Aip05g00266 802 Pfam CW-type Zinc Finger 579 621 IPR011124 GO:0008270
Aip05g00266 802 Gene3D - 175 343 IPR036890 -
Aip05g00266 802 MobiDBLite consensus disorder prediction 772 794 - -
Aip05g00266 802 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 194 311 - -
Aip05g00266 802 Gene3D - 566 624 - -
Aip05g00266 802 MobiDBLite consensus disorder prediction 697 722 - -
Aip05g00266 802 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 182 354 IPR036890 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00266 - - ahf:112747625 1575.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00266 05 2873314 2882304 Aip05g00266 05 2873314 2882304 ECH