Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00236 ATGGAGCAGCTGAAAACAATCGGTCGCGAGCTGGCAATGGGTTCGCAAGGCGGATTCGGCCAATCAAAGGAGTTCCTGGATCTGGTAAAATCCATCGGAGAAGCCCGATCCAAGGCCGAAGAAGACCGCATCGTCCTCCGCGAGATCGAAACCCTAAAACGCCGCCTCCTCGAGCCCGATATCCCAAAACGCAAGATGAAGGAGTACATCATACGCCTCCTCTACGTCGAGATGCTCGGCCACGACGCCTCCTTTGGTTACATCCACGCCGTTAAGATGACTCACGACGACGCCTTACCTCTCAAACGCACCGGTTACCTCGCCGTCACGCTTTTCCTCTCCGACGACCACGACCTCATCATCCTCATCGTCAACACAATCCAGAAGGATCTGCGTTCCGATAACTACCTTGTTGAGGCCGTTAGGAAGAAGGCCGTTATGGCGTTGCACCGCTTTTACCAGAAGTCACCCGGGGCGGTTTCGCACTTGGTTTCCAATTTTAGGAAGAGGCTGTGCGATAATGATCCTGGTGTCATGGGTGCCTCCCTTTGCCCGCTCTTTGATCTTGTAACCATTGATGCCAAATCTTATAAGGATCTTGTGAGTAGCTTTGTCAGTATCTTGAAGCAGGTTGCTGAAAGGAGGCTTCCTAAGAGCTATGATTATCATCAGATGCCCGCGCCGTTCATTCAGGTTAAGTTGCTAAAGATATTGGCACTGTTGGGGAGTGGGGATAAGCAAGCTAGTGAGAGCATGTATACTGTTCTTGGTGATATTATCAGGAAGAGCGATTCATCGACTAATATTGGGAATGCCGTTCTCTATGAGTGCATTTGTTGTGTGGCTTCCATACACCCCAATCCCAAGTTGTTAGAATCCGCTGCAGATGTTATTGCAAAGTTCTTGAAGAGTGACAGTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGTTGATAAAGTTGAGTCCGCAGATAGCAGAACAACACCAACTAGCTGTGATTGACTGCTTAGAGGACCCTGATGATACTCTGAAGCGAAAGACTTTTGAATTGCTATATAAAATGACCAAGTCCTCCAATGTCGAAGTGATCGTTGACCGCATGGTTGACTACATGATCAGCATAAGTGATGACCATTATAAAACCTATATAGCATCTCGTTGTGTGGAACTTGCTGAGCAATTTGCTCCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCCGGAGATCTTGTGAACATTAAGGTGGCACATAATCTAATGCGGTTGATTGCTGAAGGGTTTGGAGAGGATGATGATGCTACAGATAGCCAGTTGAGATCATCTGCTGTTGAATCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCCATGTTTCTTCAGGTCATCTGTTGGGTTCTGGGTGAGTACGGCACAGCTGATGGAAAACATTCTGCTTCATATATCAGTGGAAAGTTATGTGACATTGCAGAAGCATATTCAAATGATGAAACTGTTAAGGCATATGCAATTTCAGCATTGATGAAAATCTATGCTTTTGAAGTAGCAGCTGGGAGGAAAGTGGATATGCTACCTGAGTGTCAATCTTTTATTGAAGAATTATTAGCATCTCACTCAACAGATTTGCAGCAACGTGCTTATGAATTGCAAGCCGTTGTTGGTTTGGATGCACAAGCTGTTCAAGCAATATTGCCACGAGACACAAGATGTGAAGAAATTGAGGTTGATAAGGACCTTTCTTTCCTCAATGGTTATGTAGATCAAGCAATAGAAAAGGGTGCTCAGCCTTACATTGCTGAGGATGAGCGTAATGGGATGGGTAATGTGAGCAACCTCAGAAGCCAAGACCAACATGAATCGTTACAGCATGGTCTGAGATTTGAGGCATATGAACTTCCAAAGCCTCCAATGCAATCAAAAGTTGATCCAGTTTCATCGACAGATGTTGTTCCAGTACCTGAGGCATTATCTTATAGGGAGACCCACCCGATATCATCAGTGGGATCGACATCAGAGGCTGGGTCATCAGAGCTTAAGCTACGTCTTGATGGTGTTCAGAAGAAGTGGGGTAGGCCAACTTATTCGACTCCAACATCATCTACCACGAATTCTCCTTCCGAAAAACCTGCAAATGGTGCTAGCCATGTGGATAGTGCAACAGCTTCCTATTCAAAGTCACGTGATAGTCAGAATACAAAAAAGACAGAGATTGATCCAGAAAAGCAGAAGCTTGCTGCTTCATTGTTTGGTGGATCATCACAACCTGAGAGAAGATCATCCACTGGTCATAAGGCTTCAAGATCTAGTGGTGGTGGTGCAGATGGATCTCGCGGATCTAAAGCTGTGGAGAAAACGATTCAACAACCACCTCCTCCAGATTTGCTCGACTTCAGTGATGAACCAACTGTTACTAGTGCCCTTCCTTCCGTTGATCCCTTCAAGCAATTGGAAGGACTTCTTGACTCAAGCATGAGTTCTACAACAAACCATAATGCAGGTACTGCCACTAATGCACCTGATATTATGTCACTCTATGGAGACAGTACTGCAAGTCAGGATAGTTTAGATATTTTTCATGGGTTGTCGACTGAACCTACTGGGGCTACTAGTGGAGAAACAACTGTGACAACTTTGCCGCAATCTGTGAAGGGTCCAAACGCTAAAGATGCCTTGGAGAAGGATGCATTAGTGAGGCAGATGGGGGTGAACCCTACTAGTCAAAATCCCAACTTGTTCAGGGACTTGCTTGGCTAA 2778 0.4539 MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLREIETLKRRLLEPDIPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDALPLKRTGYLAVTLFLSDDHDLIILIVNTIQKDLRSDNYLVEAVRKKAVMALHRFYQKSPGAVSHLVSNFRKRLCDNDPGVMGASLCPLFDLVTIDAKSYKDLVSSFVSILKQVAERRLPKSYDYHQMPAPFIQVKLLKILALLGSGDKQASESMYTVLGDIIRKSDSSTNIGNAVLYECICCVASIHPNPKLLESAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMVDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDATDSQLRSSAVESYLRIIGEPKLPSMFLQVICWVLGEYGTADGKHSASYISGKLCDIAEAYSNDETVKAYAISALMKIYAFEVAAGRKVDMLPECQSFIEELLASHSTDLQQRAYELQAVVGLDAQAVQAILPRDTRCEEIEVDKDLSFLNGYVDQAIEKGAQPYIAEDERNGMGNVSNLRSQDQHESLQHGLRFEAYELPKPPMQSKVDPVSSTDVVPVPEALSYRETHPISSVGSTSEAGSSELKLRLDGVQKKWGRPTYSTPTSSTTNSPSEKPANGASHVDSATASYSKSRDSQNTKKTEIDPEKQKLAASLFGGSSQPERRSSTGHKASRSSGGGADGSRGSKAVEKTIQQPPPPDLLDFSDEPTVTSALPSVDPFKQLEGLLDSSMSSTTNHNAGTATNAPDIMSLYGDSTASQDSLDIFHGLSTEPTGATSGETTVTTLPQSVKGPNAKDALEKDALVRQMGVNPTSQNPNLFRDLLG 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00236 925 MobiDBLite consensus disorder prediction 871 891 - -
Aip05g00236 925 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 13 138 - -
Aip05g00236 925 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 139 921 - -
Aip05g00236 925 MobiDBLite consensus disorder prediction 755 775 - -
Aip05g00236 925 MobiDBLite consensus disorder prediction 669 801 - -
Aip05g00236 925 SUPERFAMILY ARM repeat 39 575 IPR016024 -
Aip05g00236 925 Gene3D - 12 575 IPR011989 -
Aip05g00236 925 MobiDBLite consensus disorder prediction 670 684 - -
Aip05g00236 925 PIRSF AP4_epsilon 613 797 IPR017109 GO:0015031|GO:0030124
Aip05g00236 925 PIRSF AP4_epsilon 809 925 IPR017109 GO:0015031|GO:0030124
Aip05g00236 925 PIRSF AP4_epsilon 138 669 IPR017109 GO:0015031|GO:0030124
Aip05g00236 925 PIRSF AP4_epsilon 11 138 IPR017109 GO:0015031|GO:0030124
Aip05g00236 925 Pfam Adaptin N terminal region 140 560 IPR002553 GO:0006886|GO:0016192|GO:0030117
Aip05g00236 925 Pfam Adaptin N terminal region 54 139 IPR002553 GO:0006886|GO:0016192|GO:0030117
Aip05g00236 925 MobiDBLite consensus disorder prediction 699 736 - -
Aip05g00236 925 MobiDBLite consensus disorder prediction 871 895 - -
Aip05g00236 925 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 13 138 - -
Aip05g00236 925 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 139 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00236 Aip-Chr5 2564567 2574114 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00236 K12400 - gmx:100819573 1425.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00236 05 2564567 2574114 Aip05g00236 05 2564567 2574114 ECH