Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00234 ATGGAGGAAAGCAAGAATATTATTAGTAGCAAAAACAATAGTAGTAGTAGAAAGGGTGGTAGCTTTAGATTGGGTTTGGGATCAAAAGATCATAGTGTGATTGAGCTTGGTAGCATTGACACACAAAGGCTCCTTCTAGAAGGTGGTGGTGGAGAGATGAGAGAAAAACAAAAGCCTCTCAAAAACACACTCAACCAAAGGCAAATGAAAACTCTCATTGCCTTATGTGACACCATCTTGCCTTCTATCAATCACAATAATCTTCATGGCTTCTCTGATGAATCTCTTTCTAACTTCTACAAAACTTCAGCTTCCATGGCTGGAACACCTCAACATGTTGGGGGAGTGATAAGTGAGAGATTGAAACATCCATTAACAAGGTTATTGAAGATAGGGTTATGGATGCTGTCTACATGGATTGGAACATTAATATTATGTGGGATGCCATGTCTCTCAAACAAGTTTCCTTTTATCCAAAGCTTCCCTGACCTCCCTCTTCATAAACGCCAAAAGATTCTTCAATCTTGGTCTCTTAGTTATTTTCGCCATCTTAGGATGTTTTTCAGAACCATCAAGCTTCTTACTCTACATGTCTTCTTTACTCAGGTAGATGAATCAGAAGACAATTCATCATGGAAGGCAATTGGGTATTGTGGACCTGATCCAGAATTCAAATCACAGTTGAAAGACCATTTCTTGCAAGGAAAATCAAGAGGAAGAGAAGAAGAAAATGATGATGATGATGTTGAAAATGCCATAGGACCACTTTACAAAGGATTAGTCCATCTCAACAACCCAAGAGACATCACTGCAGATGCTCTAAGAAGACATGGATTCGCGGTTTCGGTGATCCGTCGGAAGCCTAAAGTTGCTCCTAAATTGTGTTCCCCTTCATTGGTTATCCAATGTGATGCAGTGGTGGTTGGTTCTGGCTCTGGTGGTGGTGTTGTAGCTGGTGTTCTTGCAAAAGCTGGTTACAAGGTTTTGGTGTTGGAAAAAGGAGGATATTCTGCTAGGAACAATCTTACCCTTCTTGAAGGTCCAACCATGGATCAAATGTACCTCAATGGTGGTATGGTTGCAACTGATGATATGAGTGTGCTCATACTTTCAGGTTCTACTGTTGGTGGAGGCTCTGCAATTAATTGGTCAGCATGCATCAAGACCCCTGATCATGTATGCAAGGAGTGGAGTGATGAGCATCATTTGGAGTTGTTTGAGAGTGATCTGTATAAAGAAGCAATGGATGTTGTTTGTGAAAGCATGGGAGTTCAATCAGATATTGAAGATGAAGGATTCAACAATGCTGTGTTGAGAAAAGGGTGTCAAGAAATGGGGTATCCTGTGAGCAACATTCCTAGGAATTCGCCATCGGATCACTACTGCGGTTGGTGTTGCTTGGGTTGCAAGGATGGGAAGAAGAAAGGGACCTCAGAAACATGGCTTGTGGACTTGGTTAAATCAGGCAACGGAGCGATTCTTCCAGGCTGCGAGGCGATAAAAGTCTTGCACAAGAAAAAGAGAGGAAAAGATAGAAAAATTGCAAGCGGGGTGGCGTTTGAATTCGAGTACAGAGGAGCTAAGGACATATGTGTGGTGGAGTCTAAGGTGACAATTGTAGCATGTGGAGCACTTAGTACTCCAGAGTTACTAAAAAGAAGTGGCTTGAAGAATGATAACATAGGAAAAAATTTGCATCTTCACCCAGTGACAATGGCTTGGGGATACTTCCCGGATAAACCCAGTTCTGAGGTGTGGCCTGAGGCAGAGAAGAGAAGCTTTGAAGGAGGGATAATGACAGCCATGTCGCCGGTTGTTGCAGAGTTTGAGAAATCTGGATATGGAGCCGTGATCCAAACACCTTCACTGCATCCTGGTATGTTCTCAATTGTCATGCCATGGGTTTCCGGGACTGATATTAAAGATCGAATGCGAAAGTTTTCAAGAACTGCTCATATCTTTGCACTAGCAAGGGATAAAGGATCAGGGACAGTGGATTCGCCAGCCCGAATAAGTTATCATATGGAAGATTTAGATGAACATAATTTACAAAAGGGAGTTGAAAAGATACTAAGGATTCTGGCAGCAGCAGGAGCTGAAGAAATTGGAACACATCACATCAATGGAAGAAAATTGAATGTAAAGCAATCTAGCTACCATGATTTTGATAAATTTGTTAAGGAGGAGAGTTCAAGGCCGTTAACTGGGCTTACGACGCCATTGTGCTCTGCGCATCAGATGGGAAGTTGTCGGATGGGTTCAAATCCAAAGGAATCGGCAGTGAATCAAACAGGGGAGACATGGGAAATGGAAGGGCTTTATGTGGCAGATTCAAGTGTGTTCCCTACAGCATTGGGTGTGAATCCAATGATCACTGTTCAGGCTATAGCTTATTGCACAGCACAATCTGTTCTTGAAGTTCTTAGAAGGAAAAGGCGTTGA 2442 0.4238 MEESKNIISSKNNSSSRKGGSFRLGLGSKDHSVIELGSIDTQRLLLEGGGGEMREKQKPLKNTLNQRQMKTLIALCDTILPSINHNNLHGFSDESLSNFYKTSASMAGTPQHVGGVISERLKHPLTRLLKIGLWMLSTWIGTLILCGMPCLSNKFPFIQSFPDLPLHKRQKILQSWSLSYFRHLRMFFRTIKLLTLHVFFTQVDESEDNSSWKAIGYCGPDPEFKSQLKDHFLQGKSRGREEENDDDDVENAIGPLYKGLVHLNNPRDITADALRRHGFAVSVIRRKPKVAPKLCSPSLVIQCDAVVVGSGSGGGVVAGVLAKAGYKVLVLEKGGYSARNNLTLLEGPTMDQMYLNGGMVATDDMSVLILSGSTVGGGSAINWSACIKTPDHVCKEWSDEHHLELFESDLYKEAMDVVCESMGVQSDIEDEGFNNAVLRKGCQEMGYPVSNIPRNSPSDHYCGWCCLGCKDGKKKGTSETWLVDLVKSGNGAILPGCEAIKVLHKKKRGKDRKIASGVAFEFEYRGAKDICVVESKVTIVACGALSTPELLKRSGLKNDNIGKNLHLHPVTMAWGYFPDKPSSEVWPEAEKRSFEGGIMTAMSPVVAEFEKSGYGAVIQTPSLHPGMFSIVMPWVSGTDIKDRMRKFSRTAHIFALARDKGSGTVDSPARISYHMEDLDEHNLQKGVEKILRILAAAGAEEIGTHHINGRKLNVKQSSYHDFDKFVKEESSRPLTGLTTPLCSAHQMGSCRMGSNPKESAVNQTGETWEMEGLYVADSSVFPTALGVNPMITVQAIAYCTAQSVLEVLRRKRR 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00234 813 Pfam GMC oxidoreductase 669 799 IPR007867 GO:0016614
Aip05g00234 813 Gene3D - 736 811 IPR036188 -
Aip05g00234 813 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 19 812 - -
Aip05g00234 813 MobiDBLite consensus disorder prediction 7 21 - -
Aip05g00234 813 PIRSF Lg_Ch_AO 52 813 IPR012400 GO:0046577
Aip05g00234 813 SUPERFAMILY FAD/NAD(P)-binding domain 302 810 IPR036188 -
Aip05g00234 813 MobiDBLite consensus disorder prediction 1 22 - -
Aip05g00234 813 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 19 812 - -
Aip05g00234 813 Pfam GMC oxidoreductase 304 570 IPR000172 GO:0016614|GO:0050660
Aip05g00234 813 Gene3D - 296 613 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00234 Aip-Chr5 2527874 2539292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00234 29 808 Acyl Lipid Metabolism Gene Families AT4G19380 57.545 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00234 K17756 - gmx:100775376 1255.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00234 05 2527874 2539292 Aip05g00234 05 2527874 2539292 ECH