Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00215 ATGGCCTTAAACAACAAACAAAGAAAACTCAATTCCCCTTTTAACTTCAACCTCTGTATCACCCTTTTCTTTGTTGTTCTCTTCACTTTGCCAGCACTTTTCCTCCTCCACACCCCAACAAACACCTCCATATGCACCACCTTTTCTAAATCTAAGGCCTGGTCCGGCGATCTTCGCTTGGCCGAGTTTTCGTGGAACAAGCTGGATTTCTTGAACCACAAGCAACCTCCTATATCTCTCAAGATTGCAGTGTTCTCTAGAAAATGGCCTATTAGCACCACCCCAGGTGGCATGGAGCGCCATGCTCACACACTTCACACAGCTCTAGCGCGCCGAGGCCACCAAGTTCATGTGTTCACCTCTCCTGAAGGAACTCCAGTCACATCTGATGATAACAATCACCAAGCAGATGCACCTTCCTCACCTCACATTCATTGCCATGAAGGGGAGCCGGGCAGGTGGCGCTACAACAAAGCATGGGAGCAGTTTCTTGAAGAGAATCAGCGCGAACCATTCGATGTTGTCCACTCAGAAAGCGTGGCGCTTCCTCATTGGATAGCAAGAAACCTTCAGAACCTTGCCGTGTCTTGGCATGGCATAGCATTGGAGAGCTTGCAATCAAGCATATTCCAAGATTTGGCTCTTAGGCATAATGAGCCTATGTCCCCTGATTTCAACTACAGTGTTCAAGGGGTTATTCCTAAGGTTTTGAATGAGATAAGATTCTTCAGAAACTATGCTCATCATGTTGCTATTAGTGATAGTTGCGGCGAGATGCTAAGGGATGTTTACCAGATTCCAAGCAGAAGAGTGCATGTAATTGTCAATGGTGTAGATGAGGATGATTTCAGAGAAGATTTGGAACTGGGAAAAGAGTTTAGAACCCAAATTGGGATTCCAAACAATGCGAGCTTGGTTCTTGGTGTGGCTGGAAGATTGGTTAAGGACAAAGGCCATCCTCTGCTTTATGAAGCATACTCAAGGCTAATTCGTAAGCACCCTAATGTGTACTTGATAGTCGCCGGCTCTGGACCATGGGCGAATCGCTACAAGGATTTAGGGAGGCAAGTTCTTGTTCTAGGATCTATGGATCCATCCATGTTAAGAGCATTTTACAATGCTATTGACATATTTGTTAATCCTACATTAAGGCCCCAAGGGCTTGATCTTACTCTAATGGAGGCAATGATGAGTGGGAAGCCACTTTTGGCATCAAGGTTTCCAAGCATCAAAGGTACTATTGTGGTTGATGATGAATTTGGCTTTATGTTTTCCCCCAATGTTGAGTCCCTATTAGAGGCACTTGAGGCAGTGGTGAATGAAGGGAAAGAAAGGCTTGCAAGAAGGGGAAAGGCATGCCGTGAATATGCAAATTCTATGTTCACAGCTAGAAAGATGGCATTAGCATATGAGAGGCTATTCCTATGCATTAAAAAGGATACATTTTGTTCCTATCCTTGA 1461 0.4476 MALNNKQRKLNSPFNFNLCITLFFVVLFTLPALFLLHTPTNTSICTTFSKSKAWSGDLRLAEFSWNKLDFLNHKQPPISLKIAVFSRKWPISTTPGGMERHAHTLHTALARRGHQVHVFTSPEGTPVTSDDNNHQADAPSSPHIHCHEGEPGRWRYNKAWEQFLEENQREPFDVVHSESVALPHWIARNLQNLAVSWHGIALESLQSSIFQDLALRHNEPMSPDFNYSVQGVIPKVLNEIRFFRNYAHHVAISDSCGEMLRDVYQIPSRRVHVIVNGVDEDDFREDLELGKEFRTQIGIPNNASLVLGVAGRLVKDKGHPLLYEAYSRLIRKHPNVYLIVAGSGPWANRYKDLGRQVLVLGSMDPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGTIVVDDEFGFMFSPNVESLLEALEAVVNEGKERLARRGKACREYANSMFTARKMALAYERLFLCIKKDTFCSYP 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00215 486 Pfam Glycosyl transferases group 1 304 447 IPR001296 GO:0016757
Aip05g00215 486 Gene3D Glycogen Phosphorylase B; 288 458 - -
Aip05g00215 486 Gene3D Glycogen Phosphorylase B; 80 287 - -
Aip05g00215 486 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Aip05g00215 486 MobiDBLite consensus disorder prediction 126 146 - -
Aip05g00215 486 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Aip05g00215 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 81 474 - -
Aip05g00215 486 Pfam Glycosyltransferase Family 4 96 281 IPR028098 -
Aip05g00215 486 CDD GT4_PimA-like 81 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00215 Aip-Chr5 2289632 2291253 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00215 1 486 Glycosyltransferase AT4G19460 63.636 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00215 - - aprc:113860121 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00215 05 2289632 2291253 Aip05g00215 05 2289632 2291253 ECH