Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00211 ATGACAGATGAATCCGAACTTGAATGTCATGAAAAACTTAGAAAGTTATACAATTCAACAAAGACAGCTAAGCATTTTCAGCGGCATATTGTTCGTGGTATTGAAGGTTTGATCTCTGTTAGTTCCAAGCAAATGGAGATAGTGAGGAAGTTGGCTAAGGATTGCTGTAAGTATGGCACTGAGAATCAAGGGGGTGATTACCCTCTGGCAGGGCCTTCTCTTCAATTCGGTAACTCATACGAAACATTGGAAAATGAGAGAGAGACTTTGCTTGGGATCCTAGGTGATCAGATCTCTGAGCCACTGCGAGCACAAATAACTGGCGCTCCTTTGGAGGATGCTCGCCACCTCACGCATCGCTATGACAAACTTCGTCAAGAAGTAGAAGCCCAGGCTGCTGAAGTTTTGAGGCGTCGATCAAAGTTGAGGGATACTTCTGTGTCTGCAGAGAATTCCATGAGGCTTCAAACTGCAGAAACAAGGCTGAAAGAGCTTAAATCTGCCTTGACGGCACTTGGTAGGGAAGCAACCACTGCTATGTTGTCAGTTGAAGAACAACAGCAACAAGTAACCCTCCAGAGCCTTTGTACAATGGTTGATGCTGAGAGAGCTTATCATCGAAATGCCCTTGTTATTCTAGAGAAACTATATACTGAGATGATTGATGAGAGACATCCAAAAGAGTCTTCTTCATTTCCACTACCAAGAGTTGGGCATAATCAACCTACGAATGAGAATGCTAATTCAAATGGCGTTGATCATAAACACAACAATCAAACAGGAACATTCTTTTTTGCTAAGGTCATACATCCTTTTGATGCTCAAGCCGAGGGAGAATTGAGCCTATCAGTTGATGATTATGTTGTAGTTCGTCAGGTTGATCGGAATGGATGGTCTGAAGGAGAATGCAAGGGCAATGCTGGATGGTTTCCCTCTGCCTATGTACAGAGACAAGACATAATACCAGCCAGCAAGATAGCGGAAGTAGAATAA 993 0.432 MTDESELECHEKLRKLYNSTKTAKHFQRHIVRGIEGLISVSSKQMEIVRKLAKDCCKYGTENQGGDYPLAGPSLQFGNSYETLENERETLLGILGDQISEPLRAQITGAPLEDARHLTHRYDKLRQEVEAQAAEVLRRRSKLRDTSVSAENSMRLQTAETRLKELKSALTALGREATTAMLSVEEQQQQVTLQSLCTMVDAERAYHRNALVILEKLYTEMIDERHPKESSSFPLPRVGHNQPTNENANSNGVDHKHNNQTGTFFFAKVIHPFDAQAEGELSLSVDDYVVVRQVDRNGWSEGECKGNAGWFPSAYVQRQDIIPASKIAEVE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00211 330 ProSiteProfiles Src homology 3 (SH3) domain profile. 261 320 IPR001452 GO:0005515
Aip05g00211 330 MobiDBLite consensus disorder prediction 224 256 - -
Aip05g00211 330 Coils Coil 155 175 - -
Aip05g00211 330 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 1 328 - -
Aip05g00211 330 Gene3D Arfaptin homology (AH) domain/BAR domain 8 229 IPR027267 -
Aip05g00211 330 Coils Coil 114 145 - -
Aip05g00211 330 Pfam Variant SH3 domain 268 316 IPR001452 GO:0005515
Aip05g00211 330 Gene3D SH3 Domains 265 318 - -
Aip05g00211 330 SUPERFAMILY SH3-domain 264 320 IPR036028 GO:0005515
Aip05g00211 330 SMART SH3_2 264 319 IPR001452 GO:0005515
Aip05g00211 330 SUPERFAMILY BAR/IMD domain-like 8 220 IPR027267 -
Aip05g00211 330 MobiDBLite consensus disorder prediction 234 256 - -
Aip05g00211 330 PANTHER SH3 DOMAIN-CONTAINING 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00211 Aip-Chr5 2269367 2273343 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00211 - - adu:107486983 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00211 05 2269367 2273343 Aip05g00211 05 2269367 2273343 ECH