Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00200 ATGGCTTCTGCAACACAGTGTCCACCCTTTGAATTCTCTGCAAAGTACTATCATTCTGAAAATGGAGGTAGCTGTGTGAGGCAGACTAGTTTCTTTGAAGGCAAACCAGTCCTTAATCAGGGTGTTGGCTACTCTGTCATTCTTGGTTTTGGTGCTTTCTTTGCTGTTTTCACCTCTTTCTTGGTATGGTTGGAGAAGAGATATGTTGGGTCTCGCCACACCTCGGAATGGTTCAATACTGCAGGAAGAAGTGTTAAGACAGGACTCATTGCTAGTGTCATTGTTTCACAGTGGACATGGGCTGCTACAATCTTGCAAAGCTCAAATGTTGCTTGGGAATATGGAGTCAGTGGTCCTTTCTGGTATGCTAGTGGAGCAACAATCCAGGTATTCTTGTTTGGAGTAATGGCTATAGAGATTAAAAGAAAGGCTCCTCATGCTCATACAGTCTGCGAAATTGTCAAAGCCCGTTGGGGCACTGCAGCACACATTGTGTTCCTCTTTTTCTGCTTCTTGACAAATATAATTGTAACGGCAATGTTGCTCCTCGGTGGTTCGGCCGTTGTAAATGCATTAACTGGAGTGAACATTTATGCTGCAAGCTTCCTAATTCCCCTTGGAGTCATTGTCTATACACTAGCTGGTGGACTCAAAGCCACATTCTTGGCAAGCTATATACATTCTGTCATAGTGCACATTGTTTTGGTGATTTTTGTCTATCTTGTCTATACGGCGAGTAGTGAGCTTGGTAGCCCAAGTGTTGTTTACAATCGCCTGCTCGAGGTTGCTAGCAAATCAAGAACATGTCAGGATCCTATATCACACCATGGACAAGCTTGTGGTCCTGTGAGTGGGAATCACAGAGGATCTTACCTAACAATGTTGAGTTCAGGAGGCCTAGTTTTTGGGATTATAAACATAGTTGGTAACTTTGGCACTGTCTTTGTTGACAATGGGTATTGGGTGAGTGCCATTGCTGCAAGACCTTCATCAACTCATAAGGGCTACTTGTTAGGAGGCTTGGTGTGGTTTGCTGTGCCATTTTCTTTGGCTACATCATTGGGTCTGGGGGCCTTGGCCCTTGATTTACCAATCAATGAAAGCGAGGCAGGTCGTGGACTCGTTCCCCCTGCTACTGCTGTGGCTCTGATGGGGAAAGGTGGATCCATTCTTCTCCTAACCATGCTTTTTATGGCAGTGACCTCTGCTGGTTCATCAGAACTAATAGCAGTATCTTCATTATGCACATATGATATCTACCGTACCTACATAAATCCAAATGCAAGTGGAAAGAAAATCCTTAAAGTGTCAAGGTCTGTTGTTCTAGGATTTGGTTGTTTCATGGGGCTGCTTGCGGTTATACTAAACAAAGCTGGAGTTTCCTTAGGATGGATGTACCTTGCAATGGGAGTTCTTATCGGATCAGCGGTTCTTCCTATCGCTTTCATGCTTCTATGGAGAAAAGCAAATGCAATTGGTGCCATTCTTGGAACAATAATTGGCTGCATTATGGGAATCACCACATGGATTTCTGTTACAAAAGCAGAATATGGACACATAAATCTTGATACAACTGGTAGGAATGCTCCAATGCTTGCTGGGAACCTTGTTTCTATTCTGATTGGAGGAGGTGTTCATGGTGTTTGCAGCATGCTTTGGCCTCAGAACTATGATTGGAGTAGCACTAAGCAAATCACAGTGGTTGAAAAGGAAAAGACTGAATTGCCAGCAGAAGAGTTTAATGAAGAGAAGTTAGTAAGAGCAAAATCATGGATAGTGAAGTGTGGTGTTGGTTTCACTGTTTTGATAGTTATACTTTGGCCTATTCTCTCCTTACCAGCAGGAGAGTTTAGCAAAGGATACTTCTATTTCTGGGCAGTGATTGCTATAGGATGGGGTACTATTGGGTCTGCTGTGATCATTGTTTTACCAATCATGGAAAGTTGGGAAACCATCCGAACTGTGATTCTTGGAATGTTCACAAATGACAGGCTCATGGAAAAGGTGGAAGAGTTGAATCACAAGTTGCAGACAATCATCCAGGCAATGCCGGAAGCCGAGAGACTTTACTTGCTTGAGAAGGAAAAGGCGAAAAGATTAGAAGCCTCCGAGAAACAGGATGATTCCCTTCCGGCATGA 2139 0.4353 MASATQCPPFEFSAKYYHSENGGSCVRQTSFFEGKPVLNQGVGYSVILGFGAFFAVFTSFLVWLEKRYVGSRHTSEWFNTAGRSVKTGLIASVIVSQWTWAATILQSSNVAWEYGVSGPFWYASGATIQVFLFGVMAIEIKRKAPHAHTVCEIVKARWGTAAHIVFLFFCFLTNIIVTAMLLLGGSAVVNALTGVNIYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIVHIVLVIFVYLVYTASSELGSPSVVYNRLLEVASKSRTCQDPISHHGQACGPVSGNHRGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDLPINESEAGRGLVPPATAVALMGKGGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKKILKVSRSVVLGFGCFMGLLAVILNKAGVSLGWMYLAMGVLIGSAVLPIAFMLLWRKANAIGAILGTIIGCIMGITTWISVTKAEYGHINLDTTGRNAPMLAGNLVSILIGGGVHGVCSMLWPQNYDWSSTKQITVVEKEKTELPAEEFNEEKLVRAKSWIVKCGVGFTVLIVILWPILSLPAGEFSKGYFYFWAVIAIGWGTIGSAVIIVLPIMESWETIRTVILGMFTNDRLMEKVEELNHKLQTIIQAMPEAERLYLLEKEKAKRLEASEKQDDSLPA 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00200 712 PANTHER UREA ACTIVE TRANSPORTER 24 688 - -
Aip05g00200 712 Coils Coil 662 689 - -
Aip05g00200 712 Pfam Sodium:solute symporter family 79 501 IPR001734 GO:0016020|GO:0022857|GO:0055085
Aip05g00200 712 PANTHER - 24 688 IPR031155 GO:0015204|GO:0016021|GO:0071918
Aip05g00200 712 Gene3D Sodium/glucose cotransporter 67 612 IPR038377 -
Aip05g00200 712 ProSiteProfiles Sodium:solute symporter family profile. 43 515 IPR001734 GO:0016020|GO:0022857|GO:0055085
Aip05g00200 712 CDD SLC5sbd_DUR3 44 553 - -
Aip05g00200 712 TIGRFAM sss: transporter, solute:sodium symporter (SSS) family 78 501 IPR001734 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00200 Aip-Chr5 2149692 2153280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00200 7 699 Organic Solute Cotransporters AT5G45380 78.080 0.0 1104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00200 K20989 - gmx:100784391 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00200 05 2149692 2153280 Aip05g00200 05 2149692 2153280 ECH