Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00194 ATGGCAACTGATGCTTTGCTTGGAATTCTCATTGGAAACTTGAACACTTTTGTCAAGAATGAGATTGCAGCACTTTCGGGTGTTGACTCACAGATCCAAGAGCTGTCTGATAATCTCGAGGCAATCCGTGCATTGTTCCAAGATGCTGCAGGGGAGCAATTTACAAGCCATGCCATGAAGGACTGGCTGAAGAAGCTTTCCGATGCTGCATATGTGTTGGAAGATATCTTGGAAGAATGTTCAATGGAATCCAACCGTCTTAAAAGTGAAGGGTGGTTAGCCTGCTTCCATCCCAAGACTATTTTGTTTCGTCATGCTATCAGCAAGAGGATGGAAGACATGGTCGAGAGGTTCCAGCGTATTGATGATGATAGGAGAAGGTTTCAGCTGCCTCTGGGAGTCAGACAGAGGCAACAAGAAGATGATGATCTGCGGCAAACTAGTTCTGCCATCACTGAGCACCAGATGTATGGAAGAGACGAAGATAAACAGAAGATTGTAGAGTTTCTTACAAAGCACGCCAGTAGCATtgatggcctctctATCGGAGGGTCAATCTCATATCTCAACGCATTCATCATCATGGGTTTGCAGGAGGATTTTGAGCAGTATGCTGAGAAAGCAAAGACTTTGCCAGAGAGCACATCAAATGAGAACAAGCTTATCCTTTATGGATTGTACAAGCAGGCCACTGTTGGACCTGTCAACACCAGCCGTCCTGGAGTGTTCAACATGAGGGACAGAGCTAAGTGGGATGCATGGAAGGCTGTTGAAGGGAAATCCAAGGAGGAAGCAATGAATGACTACATCACCAAGGTGAAACAGCTGTTGGAAGAAGCTGGCCTCACTGCTTGA 855 0.4515 MATDALLGILIGNLNTFVKNEIAALSGVDSQIQELSDNLEAIRALFQDAAGEQFTSHAMKDWLKKLSDAAYVLEDILEECSMESNRLKSEGWLACFHPKTILFRHAISKRMEDMVERFQRIDDDRRRFQLPLGVRQRQQEDDDLRQTSSAITEHQMYGRDEDKQKIVEFLTKHASSIDGLSIGGSISYLNAFIIMGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGPVNTSRPGVFNMRDRAKWDAWKAVEGKSKEEAMNDYITKVKQLLEEAGLTA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00194 284 Gene3D - 184 284 IPR014352 -
Aip05g00194 284 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 195 279 - -
Aip05g00194 284 Coils Coil 32 52 - -
Aip05g00194 284 CDD RX-CC_like 4 117 IPR038005 -
Aip05g00194 284 Pfam Acyl CoA binding protein 198 273 IPR000582 GO:0000062
Aip05g00194 284 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 197 282 IPR000582 GO:0000062
Aip05g00194 284 CDD ACBP 197 281 IPR000582 GO:0000062
Aip05g00194 284 Pfam Rx N-terminal domain 7 91 IPR041118 -
Aip05g00194 284 PANTHER BNAA08G07670D PROTEIN 195 279 - -
Aip05g00194 284 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 215 233 IPR022408 -
Aip05g00194 284 PRINTS Acyl-coA-binding protein signature 259 276 IPR000582 GO:0000062
Aip05g00194 284 PRINTS Acyl-coA-binding protein signature 215 233 IPR000582 GO:0000062
Aip05g00194 284 PRINTS Acyl-coA-binding protein signature 198 213 IPR000582 GO:0000062
Aip05g00194 284 PRINTS Acyl-coA-binding protein signature 238 253 IPR000582 GO:0000062
Aip05g00194 284 SUPERFAMILY Acyl-CoA binding protein 197 279 IPR035984 GO:0000062
Aip05g00194 284 Gene3D - 7 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00194 Aip-Chr5 2084143 2091695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00194 195 284 Acyl Lipid Metabolism Gene Families AT1G31812 74.444 6.09e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00194 K08762 - aip:107633314 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00194 05 2084143 2091695 Aip05g00194 05 2084143 2091695 ECH