Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00146 ATGGATCAAAATAAGGGAGAGAGTTGGAGGGAATTGGTTAAGAAGATGCTTCCACCTGGTGCTTCTGTACCTGATGATGGCTCTAATCTTGACTACTCCATAGCTATGGAGTATAAAGGTCCACCAGTCTCATATGAGGTACCAAGAGTCGAGCCTGTTGATGTAAAGTCAAGAGCAATTCCTACTGCTGTACCACTCTCCGGATCACAAAGATCGGTTGCTCAAGCTGGCTCTACGGTGATTGAACCAATCCCTCTGCCGGTGTCTAGAATCGCCGGAGTAACAGGTTCTCCTAGTCATAGTCCAAGGTTGTCAGGAAGCTCAGAATCTGTGGTGTCTGTCTTACAAAACCCTGATCTTTCTTCCGCCTCGCCTTCGGTTTCACCTGCTTCAGTTCATAACCCTCCAAACAATCCTCCTAAGCAAGTCACTAACGAACCGAAGAGGGCACATGTTGTCACTTTTAGTACTGTTGAAAGATCTGAGAGGAAAGAGGTGGAGGTTGTGAAGCCAGTTTATCCAGAATATGTTGGGGTTATAAAAGAAAGGAAAAAGAAGAAGAAAATAAGAGTTTGTTATAGGTGTGGAAAAGGGAAGTGGGAAACCAAGGAGTCTTGCCTAGTTTGTAATGCCAAGTATTGCAGCAATTGTGTGCTCAGGGCGATGGGTTCAATGCCGGAAGGGCGCAAGTGTGTAACATGCATTGGTGAGGCAATTGATGAATCGAAGCGTCTGAAATTGGGTAAACATTCAAGGGTATTGTCTAGACTGTTAAGTCCTCTTGAAGTGAAACAAATTATGAAAGCAGAGAAAGAATGTTCTGCTAATCAGCTTCGGCCGGAGCAGTTGATTGTCAATGGGTTCCCCCTGAAGGATGATGAGATGGCAGAGTTACTTGGATGTCCCTTGCCTCCACGTAAACTGAAGCCTGGTAGATACTGGTATGACAAAGAATCTGGTCTATGGGGGAAGGAAGGTGAAAAGCCTGACAGAATCATAAGTTCAAACTTGAATTTCACTGGGAAACTTAGTTTGGATGCTAGTAATGGAAATACTGAGGTTTACATCAATGGTCGAGAGATTACAAAGCTTGAACTGAGGGTCCTCAAGCTGGCAAATGTGCAGTGTCCACGTGATACACACTTTTGGGTTTATGATGATGGTCGCTATGAGGAGGAAGGACAAAATAATATCAGAGGAAACATTTGGGAAAAGGCATCAACAAGATTTGTTTGTGCCCTGTTTTCTCTGCCTTTTCCCCATGGACAGCCACATGGGCAAAGAGATGAGACTAGTAATTATACTACAGTTCCCAATTATCTGGAGCAGAAGAGAGTTCAGAAGCTGCTGCTTCTTGGAATTCAAGGATCTGGAACTAGCACCATATTTAAGCAGGCAAAGTTTTTGTATGGGAACAAATTTACTGCCGAAGAGCTGCAAGATGTTAAACTGATGATCCAGAGTAACATGTATAAATATCTTAGCATTTTGCTTGATGGAAGAGAGCGCTTTGAGGAAGAGGCTATTTCTAGAATGAGTGGACAAGGTTCTCCTGGTGAAACTACAGAACCAGGTAATAATGGTGAAGCAAGCAATACAAATGAATGCATATATTCCCTCAATCCAAGGCTGAAGCATTTCTCTGACTGGCTCCTGGATATTATAGCCACTGGGGATTTAGATGCATTCTTCCCTGCAGCCACACGTGAATATGCACCGTTGGTTGAAGAAGTTTGGAAAGACCCAGCGATACAAGAAACATTCAAAAGAAAGGATGAGCTTCACTTTCTTCCAGAAGTTGCAGAGTACTTCTTAAACCGGGCTGTAGAGATATCTAGCAATGAATACGAACCTTCCGAAAGAGACATACTCTCTGCAGAAGGGGTCACTCAAGGAAATGGTTTAGCTTTCATGGAATTTTCACTTGATGACCGTAGCCAGCGGCCAGAAATGTATTCAGAAAACCTGGATGCGCAGTTGCCTCCTCAAACCAAGTACCAACTCATAAGGGTCAATGCCAAGGGTATGAATGAGGGCTGCAAGTGGGTCGAAATGTTCGAGGATGTTCGGGCAGTGGTCTTCTGCGTCTCCCTAAGCGACTACGACCAATTATGTCTCACCCCAGACAATGGTGGCAGTGGAACCCTTCTCCAAAACAAGATGATGCAAAGCAAGGAGCTTTTCGAGACCATGGTGCGGCACCCTTGCTTCCGAGACACCCCATTTGTCCTTGTCCTAAACAAGTATGATATCTTTGAGGACAAGATAGGTAAAGTGTCCCTCAATGCCTGTTGCGAGTGGTTTAATGATTTTTGTCCTGTCCATGCACATCACAACAACCAGTCACTTGCACATCAAGCATACTTCTATGTTGCCATGAAATTCAAGGACCTTTATGCATCTCTCACGGGTAAGAAACTTTTCGTGGCGCAAGCAAGGGCAAGGGACAGAGCAACAGTCGATGAAGCATTCAAGTACATAAGAGAGGTCCTCAAATGGGATGAGGAAAAAGAAGAAAACTACTATGGTCCACCAGAGGACTCATTTTACAGTACAGACATAAGCTCCTCTCCTTATCCCAGGCAAGAGTAA 2592 0.4429 MDQNKGESWRELVKKMLPPGASVPDDGSNLDYSIAMEYKGPPVSYEVPRVEPVDVKSRAIPTAVPLSGSQRSVAQAGSTVIEPIPLPVSRIAGVTGSPSHSPRLSGSSESVVSVLQNPDLSSASPSVSPASVHNPPNNPPKQVTNEPKRAHVVTFSTVERSERKEVEVVKPVYPEYVGVIKERKKKKKIRVCYRCGKGKWETKESCLVCNAKYCSNCVLRAMGSMPEGRKCVTCIGEAIDESKRLKLGKHSRVLSRLLSPLEVKQIMKAEKECSANQLRPEQLIVNGFPLKDDEMAELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFTGKLSLDASNGNTEVYINGREITKLELRVLKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFVCALFSLPFPHGQPHGQRDETSNYTTVPNYLEQKRVQKLLLLGIQGSGTSTIFKQAKFLYGNKFTAEELQDVKLMIQSNMYKYLSILLDGRERFEEEAISRMSGQGSPGETTEPGNNGEASNTNECIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETFKRKDELHFLPEVAEYFLNRAVEISSNEYEPSERDILSAEGVTQGNGLAFMEFSLDDRSQRPEMYSENLDAQLPPQTKYQLIRVNAKGMNEGCKWVEMFEDVRAVVFCVSLSDYDQLCLTPDNGGSGTLLQNKMMQSKELFETMVRHPCFRDTPFVLVLNKYDIFEDKIGKVSLNACCEWFNDFCPVHAHHNNQSLAHQAYFYVAMKFKDLYASLTGKKLFVAQARARDRATVDEAFKYIREVLKWDEEKEENYYGPPEDSFYSTDISSSPYPRQE 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00146 863 MobiDBLite consensus disorder prediction 849 863 - -
Aip05g00146 863 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 19 859 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00146 863 MobiDBLite consensus disorder prediction 94 131 - -
Aip05g00146 863 MobiDBLite consensus disorder prediction 508 533 - -
Aip05g00146 863 Pfam G-protein alpha subunit 442 830 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00146 863 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3 19 859 - -
Aip05g00146 863 MobiDBLite consensus disorder prediction 838 863 - -
Aip05g00146 863 MobiDBLite consensus disorder prediction 514 533 - -
Aip05g00146 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 445 833 IPR027417 -
Aip05g00146 863 SUPERFAMILY FYVE/PHD zinc finger 164 235 IPR011011 -
Aip05g00146 863 SUPERFAMILY Transducin (alpha subunit), insertion domain 474 625 IPR011025 GO:0007165
Aip05g00146 863 Gene3D - 476 627 IPR011025 GO:0007165
Aip05g00146 863 CDD G-alpha 447 834 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00146 863 Gene3D - 644 840 IPR027417 -
Aip05g00146 863 SMART galpha_1 435 820 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00146 863 PRINTS Alpha G protein (transducin) signature 448 463 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00146 863 PRINTS Alpha G protein (transducin) signature 616 638 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00146 863 PRINTS Alpha G protein (transducin) signature 689 717 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00146 863 PRINTS Alpha G protein (transducin) signature 742 751 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00146 863 ProSiteProfiles G-alpha domain profile. 445 842 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00146 863 MobiDBLite consensus disorder prediction 92 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00146 Aip-Chr5 1669442 1673852 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00146 - - gmx:100794534 1512.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00146 05 1669442 1673852 Aip05g00146 05 1669442 1673852 ECH