Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00133 ATGGATCATAATACTTTACGTCGTTTTGGGGAAATAATACCCAAAACTCATCGTAATCATAATTTTCTCTTATCACTCTTTCTCTTCATCTTCTTCTTCTTCTTCTCATCACACGCAGCTTTTGACCTAGCTACCATCCCCTTCAACGATGGCTATTCTCCTCTCTTCGGAGATAGCAACGTTGTTCGCTCCGATGACGGCAACGGCGTTAACCTCCTCCTCGATCGCTTCACCGGTTCTGGCTTCATATCATCCAGTATGTACAAATATGGATTCTTCAGCGCTAATATCAAGTTGCCATCAAATTATACAGCTGGAATTTGCGTCGCCTTTTATACATCAAATGGTGATGTGTTCGAGAAGACACACGATGAGTTGGACTTTGAATTTCTTGGTAACTTAGCGGGAAAACCGTGGCGGTTTCAGACCAACTTGTACGGCAACGGAAGCACCCACCGTGGCCGTGAGGAGAGGTATCGCCTGTGGTTTGATCCTACGAAGGAATACCATAGATACAGCATCCTTTGGACTGCCAAGAATGTTGTATTTTACATTGATGAAGTTCCAATTAGAGAGGTGCTAAGAAGTGCTGAAATGGGAGCTGATTACCCATCTAAACCAATGTCATTATATGCAACAATTTGGGATGCATCAAATTGGGCCACTTCAGGTGGAAAGTACAAAGTGAACTATAAATATGCACCTTTTATAGCCGAATTTAAAGACCTAGTCCTCAAGGGTTGCTCCGTTGACCCTATTGAAGAGTCCACCGTGGCCGGCCGAAGCATTTGCTCCGACCAACACGCCGATCTTGAGGCACAAGACTATGCTGCCGTGACCCCAAGGCGCCGCCTAGCGATGCGCCGGTTCCGGCAGCGTTACATGTACTATTCTTATTGTTATGATACATTAAGGTACCCTAATCCATTACCTGAATGTGACATTATACCATCGGAGAAACAAAGATTTAAGGAGACTGGAAGGTTGAAATTCGGCGGCAGCCACCGCCGGCAGTCTCGGCGGAAGGGCCGGACTACAACTCCGGTGGATGATGCCGATCAAGGTGATATGTGA 1074 0.46 MDHNTLRRFGEIIPKTHRNHNFLLSLFLFIFFFFFSSHAAFDLATIPFNDGYSPLFGDSNVVRSDDGNGVNLLLDRFTGSGFISSSMYKYGFFSANIKLPSNYTAGICVAFYTSNGDVFEKTHDELDFEFLGNLAGKPWRFQTNLYGNGSTHRGREERYRLWFDPTKEYHRYSILWTAKNVVFYIDEVPIREVLRSAEMGADYPSKPMSLYATIWDASNWATSGGKYKVNYKYAPFIAEFKDLVLKGCSVDPIEESTVAGRSICSDQHADLEAQDYAAVTPRRRLAMRRFRQRYMYYSYCYDTLRYPNPLPECDIIPSEKQRFKETGRLKFGGSHRRQSRRKGRTTTPVDDADQGDM 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00133 357 PIRSF EndGlu_transf 15 318 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aip05g00133 357 Gene3D - 35 313 - -
Aip05g00133 357 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31 336 - -
Aip05g00133 357 Pfam Glycosyl hydrolases family 16 51 232 IPR000757 GO:0004553|GO:0005975
Aip05g00133 357 ProSitePatterns Glycosyl hydrolases family 16 active sites. 125 135 IPR008263 GO:0004553|GO:0005975
Aip05g00133 357 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 31 336 IPR044791 GO:0004553
Aip05g00133 357 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 314 IPR013320 -
Aip05g00133 357 MobiDBLite consensus disorder prediction 326 357 - -
Aip05g00133 357 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 276 313 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Aip05g00133 357 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 39 240 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00133 Aip-Chr5 1550195 1555061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00133 13 335 Glycoside Hydrolase AT1G32170 68.421 4.10e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00133 K08235 - gmx:100786236 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00133 05 1550195 1555061 Aip05g00133 05 1550195 1555061 ECH