Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00131 ATGGCATCTAAGTCACCTCGATTCAAACACGGTTCATCAATGGTTAGAAAAATCACCCAACTGAGCAATGATCTTGATCATGAACAAGATCAAGAGAGTGAGAATGGTGGTGGTGGTGTTGCTACCTACACAGTTCACATTCCACTAACCCCTGATAACCAACCAATGGAGATTGCTCTGGAGAGATCGACTTCGAGGCGAGTGGAGGACCAATATGCATCTAGTTCATTGTTCACTGGGGGTTTCAATCAGGTTACAAGGGCTCATTTGAAGGAGAAGATGATTGAGTCTGAGTCAAGCCACCCCCAGATGTCCGGGGTGAAGGGATCGTCCTGTGCGGTCCCTGGCTGTGATGGGAAGGTTATGACTGATGAGAGGGGGTTAGACATACTCCCTTGTGAGTGTGATTACAAGATTTGCAGGGATTGTTACAGGGATGCTTTGAGAACTGGTGAGGGGATTTGCCCTGGCTGCAAGGAACCTTACAAGGAGTTGGATGCGAATGATGGATATAGGGCCGGCCAGCAGCCTGCACTTCCCTTACCACCCGGTGCTGGAGTGTCGAAGATGGAGAGGAGGTTGTCGTTGATGAAATCGGGGACTTTGACAAGGAGCCAGGCTAATAATGACTTTGATCATGCTCAGTGGTTGTTTGAAACTAAGGGGAGCTATGGCTATGGGAATGCTATGTGGCCGAAAGAGCCCGAAAACGATGCTAGTTCTGTTTCTGAATGGATGGGTGGTGACCCTCATGTGTTCAAGGAAAAGCCATGGAGACCTTTGACCCGGAAATTGACTATCTCTGCTGCAATTCTGAGTCCATATAGGCTAATAATATTTGCTCGGCTAGTGATTCTTGGTTTCTTCTTAGCGTGGAGGGTTCGAAACCCCAATGAAGATGCACTCTGGCTATGGGGTATGTCTGTTGTTTGTGAAATCTGGTTTGCCTTCTCCTGGCTGCTTGATCAGCTTCCTAAGCTCTTCCCTGTCAACCGGTTCGCCGATCTTGATGTTCTGAAGGAGAAGTTTGAAACTCCCACTCCCAACAATCCTTCTGGCAAGTCTGATCTCCCAGGAATAGATATTTTTGTGTCGACTGCGGATCCTGAAAAAGAACCTCCACTTGTCACAGCAAATACTATTCTTTCCATTCTAGCTGCCGATTATCCGGTAGAGAAACTTGCATGTTATGTCTCTGACGATGGAGGTGCACTTCTAACTTTTGAGGCCATGGCAGAGGCTGCAAGTTTTGCCAACTTGTGGGTTCCTTTTTGCCGAAAGCATGACATTGAACCGAGGAACCCCGACTCATACTTTAGTATGAAGAGAGATCCCTACAAGAACAAAGTTCTCCCTGACTTTGTAAGGGATCGAAGGAGGGTAAAGCGTGAATATGATGAGTTCAAGGTTCGGATCAATGGCCTTCCCGATTCAATCCGCCGGCGTTCTGATGCTTACAATGCCAGAGAAGAGATAAAAGCTATGAAGCTTTGGAGGGAGAATGGACATGATGAACCAATGGAGAATGTGAAAATTCCTAAAGCTACTTGGATGGCAGATGGTACCCACTGGCCCGGCACTTGGACAACGCCAGCATCGGAACATTCTAGGGGCGATCATGCTAGTATCATACAGGTCATGTTAAAACCTCCAAGTGATGAACCACTAACTGGTGTTGCATCAGATGCAAATGCTATGAATTTAACCGAAGTTGATATTCGCCTTCCCATGCTTGTCTATGTTTCTCGAGAAAAAAGACCAGGCTATGATCACAACAAGAAGGCCGGGGCGATGAATGCGCTGGTCCGAGCCTCAGCCATTATGTCAAATGGTCCTTTCATACTTAATCTGGACTGTGACCATTACATATTTAATTCCCAGGCATTGAGAGAAGGTATGTGCTTCATGATGGACCGTGGTGGCGACAGGATCTGCTATGTTCAATTCCCTCAGAGGTTCGAAGGAATAGACCCTTCGGATCGCTATGCCAATCATAACACAGTCTTCTTTGATGTCAATATGCGCGCCCTTGATGGGATTCAAGGTCCTGTATATGTAGGCACAGGTTGCTTATTCAGAAGGACTGCACTCTACGGCTTTGATCCACCTCGG 2112 0.4706 MASKSPRFKHGSSMVRKITQLSNDLDHEQDQESENGGGGVATYTVHIPLTPDNQPMEIALERSTSRRVEDQYASSSLFTGGFNQVTRAHLKEKMIESESSHPQMSGVKGSSCAVPGCDGKVMTDERGLDILPCECDYKICRDCYRDALRTGEGICPGCKEPYKELDANDGYRAGQQPALPLPPGAGVSKMERRLSLMKSGTLTRSQANNDFDHAQWLFETKGSYGYGNAMWPKEPENDASSVSEWMGGDPHVFKEKPWRPLTRKLTISAAILSPYRLIIFARLVILGFFLAWRVRNPNEDALWLWGMSVVCEIWFAFSWLLDQLPKLFPVNRFADLDVLKEKFETPTPNNPSGKSDLPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPDSYFSMKRDPYKNKVLPDFVRDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIKAMKLWRENGHDEPMENVKIPKATWMADGTHWPGTWTTPASEHSRGDHASIIQVMLKPPSDEPLTGVASDANAMNLTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIFNSQALREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPR 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00131 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 554 701 IPR029044 -
Aip05g00131 704 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 52 704 - -
Aip05g00131 704 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 176 IPR013083 -
Aip05g00131 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 375 701 IPR029044 -
Aip05g00131 704 SUPERFAMILY RING/U-box 96 169 - -
Aip05g00131 704 Pfam Cellulose synthase 360 704 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aip05g00131 704 Pfam RING/Ubox like zinc-binding domain 114 163 - -
Aip05g00131 704 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 52 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00131 Aip-Chr5 1526498 1529013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00131 30 704 Glycosyltransferase AT3G03050 75.480 0.0 1064
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00131 K20924 - gmx:100813900 1187.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00131 05 1526498 1529013 Aip05g00131 05 1526498 1529013 ECH