Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00114 ATGTCGTCGATAAAGACTGTTAAGGTCAGTAACGTTTCCTTGGGAGCTACTGATCGAGACATTAAGGAGTTCTTTTCTTTTTCTGGTGACATTGAATATGTTGAGCTTCGGAGTCATGATGAACGGTCCCAAATTGCTTATGTTACCTTCAAGGATGCACAGGGAGCTGAGACTGCAGTACTGCTATCGGGAGCAACTATAGTTGATTTGTCGGTTACAATAACTCCAGATCCAGATTACAAACTTCCACCTGCTGCCTTTGCATCAGCTCCAAACGAAAGTCAAGCTCCCGGTGGTGCTGATTCTGCTTTAAGGAAGGCAGAGGATGTGGTTTCAAGCATGCTGGCCAAGGGCTTTATCTTAGGGAAGGATGCTGTCAACAAAGCAAAGAATTTTGATGAGAAGCACCAATTAACCTCATCTGCCTCAGCAAAAGTTGCATCTATTGATCAGAAAATTGGGTTCAGTGAGAAAATAACTGCTGGTGCTTCAGCTGTAAGTGGTAGAGTTCGAGAGGTTGACCAAAAGTTCCAGGTTTCAGAGAAGACCAAATCGGCATTTGCAGCTGCAGAGCAAAAAGTCAGTACTGCTGGTTCTGCCTTGATGAAGAATCGCTATATACTTACTGGTGCCTCCTGGGTAACAGGTGCTTTCAACAGGGTTTCTAAGGCGGCTGAGGATGTAGGACAGAAGACGAAAGAGAAAGTAGTTAGCGCAGAAGAGCAACAAAAGCGACAAGTGGAAGATCAGTATGCGCAAGTCCTTTCTGAGTCCCCAAAAGCTGGTTCGGCAGCAAGTGAACATCACTCTTCCAAGCCTGCCCCTGCTCAGGGTTTGATCCTTTGA 846 0.4563 MSSIKTVKVSNVSLGATDRDIKEFFSFSGDIEYVELRSHDERSQIAYVTFKDAQGAETAVLLSGATIVDLSVTITPDPDYKLPPAAFASAPNESQAPGGADSALRKAEDVVSSMLAKGFILGKDAVNKAKNFDEKHQLTSSASAKVASIDQKIGFSEKITAGASAVSGRVREVDQKFQVSEKTKSAFAAAEQKVSTAGSALMKNRYILTGASWVTGAFNRVSKAAEDVGQKTKEKVVSAEEQQKRQVEDQYAQVLSESPKAGSAASEHHSSKPAPAQGLIL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00114 281 MobiDBLite consensus disorder prediction 236 281 - -
Aip05g00114 281 PANTHER BINDING PARTNER OF ACD11 1 3 264 - -
Aip05g00114 281 SMART rrm1_1 6 75 IPR000504 GO:0003723
Aip05g00114 281 SUPERFAMILY RNA-binding domain, RBD 3 78 IPR035979 GO:0003676
Aip05g00114 281 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 67 IPR000504 GO:0003723
Aip05g00114 281 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 5 77 IPR000504 GO:0003723
Aip05g00114 281 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 264 - -
Aip05g00114 281 Coils Coil 237 257 - -
Aip05g00114 281 Gene3D - 2 75 IPR012677 -
Aip05g00114 281 MobiDBLite consensus disorder prediction 248 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00114 Aip-Chr5 1296592 1299515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00114 - - gmx:100809613 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00114 05 1296592 1299515 Aip05g00114 05 1296592 1299515 ECH