Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00090 ATGGCACTCAGCAACAATGTGATCGGAGGCATAAACCTAGTGGCGGTGATACTCTCAATCCCCATAATCGGCGCCGGCATATGGCTAACAAACGAGCCAGCAGACTCGTGCGTGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAGGTCTGGTCGGAGCCTTCTTCAGGATCCCCTGCCTCCTTATATCGTACCTGGTAGCCATGCTCGTGCTCATAGTGTTGCTGGTCATCATGGTGGTGTTTGTGTACATGGTCACCATTCGTGGCCATGGAGTGATAGAACCCAACCGTGCTTACTTGGAGTACCATCTGGACGATTTCTCTTCGTTCCTAAGAAGACGGGTGAGAAGCTCCTTCAAATGGGACCAGATCAGAGCCTGCCTTAGCTCCAGTAACATGTGTGCCGACCTCAATCAGAGATTCCGAATGCCTCAGGATTTCTTCAACGCACATCTTACACCAATGCAGTCAGGGTGTTGTAAGCCCCCAACACTATGTGGGTACACGTTTGTGAATCCAACGTATTGGATAAGCCCGATAAACAGTGCGGAGGACATGGATTGCCTTCAGTGGAGCAACGACCAAACACAACTTTGCTATGCGTGTGACTCCTGCAAGGCTGGTTTGTTGGCTCATCTCAGGAAGGAGTGGAAGAGGGCCAATGTCATTTTGATCATCTCCATCGTTGCATTAATCATCATATATTTGGTTGGCTTTTGTGCTTTTAGAAATGCTAACACTGAGGATCTCTTCCGCAGATACAAACAAGGCTACACTTAG 789 0.4702 MALSNNVIGGINLVAVILSIPIIGAGIWLTNEPADSCVKXXXXXXXXXXXAGLVGAFFRIPCLLISYLVAMLVLIVLLVIMVVFVYMVTIRGHGVIEPNRAYLEYHLDDFSSFLRRRVRSSFKWDQIRACLSSSNMCADLNQRFRMPQDFFNAHLTPMQSGCCKPPTLCGYTFVNPTYWISPINSAEDMDCLQWSNDQTQLCYACDSCKAGLLAHLRKEWKRANVILIISIVALIIIYLVGFCAFRNANTEDLFRRYKQGYT 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00090 262 Pfam Tetraspanin family 7 243 IPR018499 GO:0016021
Aip05g00090 262 PANTHER TETRASPANIN-8-RELATED 1 261 IPR044991 GO:0009734|GO:0016021
Aip05g00090 262 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00090 Aip-Chr5 1065401 1066444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00090 1 262 Miscellaneous Gene Families AT5G46700 60.967 4.77e-119 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00090 - - adu:107487053 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00090 05 1065401 1066444 Aip05g00090 05 1065401 1066444 ECH