Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02938 ATGAAAGATGGGATGGGATTGGGAACGAAGGTGTCGTTTGGTGTGATCGGAGTGAGTTTTGTGATATTGGTTGCGGTGAAGATGTCGGAGTTGTTGAATAAGGCGAAGAACTATGTGAACGATAAAGTGGCCAACATGCCGAAGCCCGAGGCCAGTGTGGCTGACGTGGATTTCATGCGCGTCGGGAAGGATGGCGTCGAGTACCTTGCCAAGGTTAATGTTTCCAATCCCTATTCTACCCCTCTTCCCATTTGTGAGATCAAGTACTCTCTCAAGAGTGATGGCAGAGAGATAGCATCAGGTGTAATACCAGACCCTGGTTCATTGAAGGCAAATGGGACAACATTGCTTGATGTCCCAGTTAAGGTTGCTCACAGCATATTAGTGAACTTGATTAGGGACATTGGTAGAGACTGGGACATTGATTACCAATTGGACCTTGGCTTAGTTATTGATATTCCTTGTGTTGGTAACATCACCATTCCTGTTTCTCAGAAGGGAGAGATTAAGCTTCCAACCCTCAAGGACATGTTTACTGGTGGCTCTAAGAATACTGATCCTGCTCCTGCTCCTGCTACTACCTAA 585 0.4615 MKDGMGLGTKVSFGVIGVSFVILVAVKMSELLNKAKNYVNDKVANMPKPEASVADVDFMRVGKDGVEYLAKVNVSNPYSTPLPICEIKYSLKSDGREIASGVIPDPGSLKANGTTLLDVPVKVAHSILVNLIRDIGRDWDIDYQLDLGLVIDIPCVGNITIPVSQKGEIKLPTLKDMFTGGSKNTDPAPAPATT 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02938 194 PANTHER - 19 186 IPR045043 -
Aip04g02938 194 PANTHER DESICCATION-RELATED PROTEIN LEA14-RELATED 19 186 - -
Aip04g02938 194 Gene3D - 44 178 - -
Aip04g02938 194 SMART why 51 168 IPR013990 GO:0009269
Aip04g02938 194 SUPERFAMILY LEA14-like 30 177 - -
Aip04g02938 194 Pfam Late embryogenesis abundant protein 71 167 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02938 Aip-Chr4 122143535 122146562 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02938 - - gmx:547837 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02938 04 122143535 122146562 Aip02g00190 02 2826850 2828739 PCT