Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02933 ATGGGTCACCAAGGACTTTTGTCCAAGATTGCAACCAATGACAAGCATGGAGAGAACTCTCCATATTTTGATGGGTGGAAAGCTTATGATAGAAACCCATTTCACCCAACGAAAAATCCTCAAGGTGTTATCCAGATGGGTCTTGCTGAAAATCAGCTTTGCTTCGATCTTATTGAAGAGTGGATAAGGAACAATTCCAAAGCTTCCATATGTACTCCTGAAGGAGGTGTGGCAAATTTCATGTCAAAAGCGAGGGGTGGTAGGGTCAAATATGATCCTGAGCGTATATTGATGAGTGGAGGAGCAACAGGTGCAAATGAATTAATAATGTTTTGTTTGGCTGATCCTGCTGATGCTTTCATGGTTCCCACTCCTTATTATCCAGCATTCGTGCGTGATCTTGGTTGGAGAACTGGTGTGCAACTTATTCCTGTTCATTGTGATAGTTCTAACAACTTCAAGATAACAAGAGAAGCCCTTGAAGAAGCTTATCGTGAAGCAAAACAAAACAACATCAATGTGAAGGGTTTGATCATAACAAATCCTTCAAACCCTTTGGGAACCACATTGGACAAAGAAACCCTCAAAAGCCTTGTGAGGTTCATCAATGAGAAGAACATTCACTTGGTTTGTGATGAAATCTATGCCGCCACCGCTTTTACCACTCCAAGATTTGTGAGTATCTCTGAAGTCATGCTAGAAATGGAGTGCAAGAAAGAACTCATTCACATAATCTATAGTTTATCAAAGGATATGGGGTTACCCGGTTTTAGGGTTGGTATTGTTTATTCCTACAATGATGATGTTGTGAGTTGCGGCCGCAAAATGTCGAGTTTCGGATTAGTCTCTTCTCAAACTCAACATTTTCTAGCATCGTTGCTTTCTGACGAGGATTTTATCGATAGATATTTAGAAATTAGCAAAAGGAGACTCGCTAAGCGTCATAGTTTCTTCACGAAAGGGCTCGAAACGGTTAACATTGCTTGCTTGCCAAGCAATTCAGGACTATTTTGTTGGATGAACTTGAGGAGGCTATTGAAGGAGAAAACTTTTGAAGGTGAAATGAAGCTTTGGCGTGTGATCATCAATGAGGTGAAGCTCAATGTTTCACCGGGGTCAAGTTTCAATTGTTCCGAGCCTGGTTGGTTTAGGGTTTGCTTTGCTAACATGGATGATGAGACTGTGGAGGTTGCATTGAAAAGGATTAGGGCTTTTGCTGGGAGAGAAACTAATAATGGGAAAAGGGTTGAACTGAAACGTTGGAAAAGCATTAATACTAATAAGTTAAGGCTAAGCTTCAACTCTAGAAGGTTTGATGAGAATGTTATGTCACCTCATCACATGATGTCTCCTCATTCACCAATGCCTCACTCACCCCTTGTTCGTGCCACTTAA 1395 0.41 MGHQGLLSKIATNDKHGENSPYFDGWKAYDRNPFHPTKNPQGVIQMGLAENQLCFDLIEEWIRNNSKASICTPEGGVANFMSKARGGRVKYDPERILMSGGATGANELIMFCLADPADAFMVPTPYYPAFVRDLGWRTGVQLIPVHCDSSNNFKITREALEEAYREAKQNNINVKGLIITNPSNPLGTTLDKETLKSLVRFINEKNIHLVCDEIYAATAFTTPRFVSISEVMLEMECKKELIHIIYSLSKDMGLPGFRVGIVYSYNDDVVSCGRKMSSFGLVSSQTQHFLASLLSDEDFIDRYLEISKRRLAKRHSFFTKGLETVNIACLPSNSGLFCWMNLRRLLKEKTFEGEMKLWRVIINEVKLNVSPGSSFNCSEPGWFRVCFANMDDETVEVALKRIRAFAGRETNNGKRVELKRWKSINTNKLRLSFNSRRFDENVMSPHHMMSPHSPMPHSPLVRAT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02933 464 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 247 260 IPR004838 GO:0003824|GO:0009058|GO:0030170
Aip04g02933 464 Gene3D Aspartate Aminotransferase, domain 1 32 401 IPR015422 GO:0003824
Aip04g02933 464 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2 423 - -
Aip04g02933 464 Pfam Aminotransferase class I and II 76 402 IPR004839 GO:0009058|GO:0030170
Aip04g02933 464 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 273 296 - -
Aip04g02933 464 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 207 230 - -
Aip04g02933 464 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 241 265 - -
Aip04g02933 464 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 171 195 - -
Aip04g02933 464 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 46 72 - -
Aip04g02933 464 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 423 - -
Aip04g02933 464 Gene3D - 66 296 IPR015421 GO:0003824
Aip04g02933 464 Coils Coil 150 177 - -
Aip04g02933 464 SUPERFAMILY PLP-dependent transferases 12 406 IPR015424 -
Aip04g02933 464 MobiDBLite consensus disorder prediction 444 464 - -
Aip04g02933 464 CDD AAT_like 44 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02933 Aip-Chr4 122044759 122048796 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02933 K20772 - gmx:100775969 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02933 04 122044759 122048796 Aip02g00178 02 2702989 2707161 PCT