Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02720 ATGTGGAAGCTCGCGCGATTCGCCGCAACAAGTTTGGCCCGATCGCGGCGGTTCTCGACGGCGATTCCAGGTCCGTGTATGGTTCACAAGCGCGGTGCAGATATCCTGCACGATCCATGGTTCAACAAGGATACTGGGTTTCCCTTGACTGAAAGGGATCGGTTGGGGCTTCGGGGTCTCCTTCCTCCTCGTGTCATATCGTTCGAGCACCAATATGAACGTTTCATGAATTCATACAGGTCCTTGGAGAAGAACACCCGGGGCCAATCAGATAAATTTGTCTCCTTAGCGAAATGGAGAATCTTAAATAGACTGCATGACAGGAACGAGACTCTGTACTACAGAGTTCTTATTGATAATATTAAAGAGTTTGCACCAATAATCTATACTCCTACAGTTGGATTAGTGTGTCAAAATTATTCAGGGTTATATAGGCGCCCACGTGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGATGTCGATGATCTATAACTGGCCAGCAAATCAGGTAGATATGATTGTCTTGACAGATGGTAGTCGTATTCTTGGCTTAGGTGACCTTGGAGTTCAAGGGATTGGAATACCAATAGGAAAACTTGATATGTATGTTGCTGCTGCTGGTATGAACCCACAAAGAATACTTCCAGTTATGTTAGATGTTGGCACAAACAATCAAAAGCTACTTGAAGATCCACTTTATTTGGGAGTTCGACAACCTAGGTTGGAAGGTGAAGAGTACCTAGCAGTTGTGGATGAATTCATGGAAGCTGTCCATGCTCGTTGGCCTAAGGCTATTGTGCAGTTTGAAGATTTCCAAATGAAGTGGGCTTTTGAAACTTTGTACCGATATCGCAGAAAGTTTTGTATGTTTAATGATGATATTCAGGGCACTGCTGGTGTTGCACTTGCCGGATTACTGGGAACTGTAAGAGCCCAAGGTCGACCATTGTCTGATTTTGTGAATCAAAAGATAGTTGTGGTTGGAGCTGGGAGTGCAGGTCTTGGTGTTCTTAAGATGGCTGTCCAGGCAGTTTCAAGGATGTCCGGGTGCAGTGAAACAGCTGCCAAAAGTCAATTCTATTTAATTGATAAGAATGGTCTTGTCACAACAGAAAGGAGCAATCTAGATCCGGCTGCAGTTCCCTTTGCTAAACACCAAAGTGACCTAGAAGGTCTTGCAGAGGGTGCTAGTATAATTGAAGTGGTTAAGAAGATTAAGCCACATGTGCTTGTTGGATTGTCTGGGGTTGGTGGTATTTTCAATGAGGAGGTGCTTAAGGCAATGAGAGAATCTGTTTCAACAAAACCTGCTATCTTTGCAATGTCTAATCCCACAATGAATGCTGAATGCACTGCTACTGATGCTTTTAACCATGCGGGAGAAAATATAGTGTTTGCCAGTGGAAGCCCTTTCGAAAATGTAAATCTTGGTGATGGAAAATTTGGCCATGTAAATCAAGCCAACAACATGTACCTGTTCCCAGGGATTGGTTTGGGAACACTTCTGTCAGGTGCTCGTCTCATAACGGATGGAATGTTGCAGGAAGCAGCTGAATGTCTTGCTTCATACATGACTGAGGAAGATATCCATAAAGGAATTTTGTATCCATCAATTGATTGTATACGAAACGTTACAGCAGAGGTTGGGGCTGCTGTTCTAAGAGCAGCAGTTGTAGAAGGGCTGGCTGAAGGACATGGTGATGTAGGATCAAAAGAACTTGCACACATGTCAAAAGAGGATACAGTGGGGTACGTTAGAGAAAACATGTGGTTCCCTGAGTATAGCCCCCTTGTTCATGAGAAGTAA 1812 0.4376 MWKLARFAATSLARSRRFSTAIPGPCMVHKRGADILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEHQYERFMNSYRSLEKNTRGQSDKFVSLAKWRILNRLHDRNETLYYRVLIDNIKEFAPIIYTPTVGLVCQNYSGLYRRPRGMYFSAKDKGEMMSMIYNWPANQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDMYVAAAGMNPQRILPVMLDVGTNNQKLLEDPLYLGVRQPRLEGEEYLAVVDEFMEAVHARWPKAIVQFEDFQMKWAFETLYRYRRKFCMFNDDIQGTAGVALAGLLGTVRAQGRPLSDFVNQKIVVVGAGSAGLGVLKMAVQAVSRMSGCSETAAKSQFYLIDKNGLVTTERSNLDPAAVPFAKHQSDLEGLAEGASIIEVVKKIKPHVLVGLSGVGGIFNEEVLKAMRESVSTKPAIFAMSNPTMNAECTATDAFNHAGENIVFASGSPFENVNLGDGKFGHVNQANNMYLFPGIGLGTLLSGARLITDGMLQEAAECLASYMTEEDIHKGILYPSIDCIRNVTAEVGAAVLRAAVVEGLAEGHGDVGSKELAHMSKEDTVGYVRENMWFPEYSPLVHEK 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02720 603 CDD NAD_bind_1_malic_enz 296 594 - -
Aip04g02720 603 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 17 295 IPR046346 -
Aip04g02720 603 PANTHER MALIC ENZYME 1 599 - -
Aip04g02720 603 PIRSF ME 6 602 IPR001891 GO:0004470|GO:0004471
Aip04g02720 603 Pfam Malic enzyme, N-terminal domain 106 286 IPR012301 GO:0004471
Aip04g02720 603 SMART malic_2 106 286 IPR012301 GO:0004471
Aip04g02720 603 PANTHER MALIC ENZYME-RELATED 1 599 - -
Aip04g02720 603 SMART Malic_M_2 296 559 IPR012302 GO:0051287
Aip04g02720 603 ProSitePatterns Malic enzymes signature. 292 308 IPR015884 GO:0004471
Aip04g02720 603 Pfam Malic enzyme, NAD binding domain 296 558 IPR012302 GO:0051287
Aip04g02720 603 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 296 600 IPR036291 -
Aip04g02720 603 Gene3D - 294 603 - -
Aip04g02720 603 Gene3D - 30 293 IPR037062 GO:0004471
Aip04g02720 603 PRINTS Malic enzyme signature 112 136 IPR001891 GO:0004470|GO:0004471
Aip04g02720 603 PRINTS Malic enzyme signature 172 201 IPR001891 GO:0004470|GO:0004471
Aip04g02720 603 PRINTS Malic enzyme signature 208 230 IPR001891 GO:0004470|GO:0004471
Aip04g02720 603 PRINTS Malic enzyme signature 267 285 IPR001891 GO:0004470|GO:0004471
Aip04g02720 603 PRINTS Malic enzyme signature 292 308 IPR001891 GO:0004470|GO:0004471
Aip04g02720 603 PRINTS Malic enzyme signature 326 342 IPR001891 GO:0004470|GO:0004471
Aip04g02720 603 PRINTS Malic enzyme signature 435 451 IPR001891 GO:0004470|GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02720 Aip-Chr4 116849677 116857101 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02720 K00028 - gmx:100806545 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02720 04 116849677 116857101 Aip04g02720 04 116849677 116857101 ECH
Aip04g02720 04 116849677 116857101 Aip02g00655 02 9730249 9736148 PCT