Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02561 ATGGCTTCTTCGGAAGCCGATTCCCGGCTGGTCCAGGTCATCATCCCGGCGCTTGAGAAGATCATCAAGAACGCATCGTGGCGGAAGCACGCCAAGCTCGCTCACGAGTGCAAGTCCGTCATCGAAACCCTAACCTCACCGCAATCACAGCAGCAGCAGAGCAATCCTCAGTCGCCGGGGTCCGAAGACGGCGCCGCCGATCCCGAAGCCTCAGTCCCCGGTCCGCTCAACGGCGGCGGCGCCATCGAGTACTCCCTCGCGGAGTCCGAATCAATCCTCCGGCCTCTCATCAACGCCGCCAACTCCGGCGTCCTGAAGATAGCTGAGCCAGCCGTTGATGCTCTTCAGAAGCTCATCGCCCATGGTTACCTCCGCGGCGAGGCTGACCCCGCCGGTGGCTGCCCTGAGGCGAAGCTTCTCGCGAATCTTATCGAATCCGTCTGCAAGTGCCACGATCTCGGCGATGATGCCGTCGAATTGCTGGTTCTGAAGTCTCTTTTATCTGCAGTAACCTCAATTTCACTGAGAATCCACGGTGATTGCTTGCTTTTGATTGTGAGAACTTGTTATGATATATACCTTGGTAGCAAGAATGTGGTGAATCAAACAACGGCGAAGGCTTCGTTGATTCAGATGCTTGTGATTGTTTTTAGGAGAATGGAGGCGGATTCCTCCACAGTTCCGGTTCAGCCGATTGTTGTGGCTGAACTGATGGCGCCTGTGGAGAAATCTGATGCAGATAACTCGATTACACAGTCTGTGCAGGGTTTTATAACGAAGGTTATGCAGGACATTGATGGGGTTTTGAACCCTGCTACGCCGAGTAGCAGGGTTTCCGCATTGGGAGGCCACGATGGTGCATTTGAGACCACTACCACTGCCACTGTGGAGACCACGAATCCGGCGGATTTGTTGGATTCCAGTGACAAGGACATGCTGGATGCGAAGTATTGGGAGATCAGTATGTACAAGACTGCATTGGAAGGGAGGAAAGGGGAGCTTGTGGATGGCGAGGTGGTGGAGAGGGATGATGATATGGAGATCCAGATTGGGAATAAGCTGAGGAGGGATGCATTTTTGGTGTTCAGGGCACTTTGTAAGTTATCTATGAAGACACCCCCTAAGGAGGCGTCCGCAGATCCGCAGCTGATGAAGGGGAAGATTGTGGCCCTAGAGCTGTTGAAGATCTTGCTGGAGAATGCTGGAGCTGTCTTCAGGACTAGCGACAGGTTTTTGGATGCCATTAAGCAGTACTTATGCTTATCATTGTTGAAGAACAGTGCATCAAATCTTATGATTGTTTTTCAACTATCATGCTCCATATTCATCAGTCTGGTTGCTAGATTTAGAGCTGGATTGAAGGCAGAAATTGGTGTTTTTTTCCCTATGATTGTCCTCAGAGTTCTAGAAAATGTTGCTCAACCTAATTTTCAGCAAAAAATGATAGTCCTCCGTTTTCTGGAGAAGCTTTGTGATGATTCACAGATATTGGTGGACATTTTTATCAACTATGACTGCGATGTCAATTCGTCAAACATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCCCAAGGAATCCCTCCTGGTGTAACCACCACGGTTTTGCCACCTCAAGAGGAAACATTAAAGCTTGAAGCATTGAAATGCTTGGTTGCTGTATTAAAATCTATGGGAGATTGGATGAACAAACAGTTGCGCATTCCAGAACCTCTTTCATCAAAGAAAGTGGAAGCAGTTGATAATGGGCATGAGGCTGGAGGTCATCCTATGGTAAATGGGAATGGAGAAGAGTCAGCTGAAGGATCAGAAACTCATTCTGAGATCTCCAATGATGCATCTGATGTTTCCACCATTGAGCAACGCCGGGCATATAAATTGGAACTCCAGGAAGGTATATCATTGTTTAATAGGAAGCCTAAGAAAGGAATTGAATACCTCATTAATGCCAACAAAGTGGGTAACTCTCCGGAAGATATAGCTGCTTTTCTTAAAGATGCTTCTGGGTTGAACAAGACTCTGATTGGTGATTATCTGGGAGAAAGGGATGAAATGTCCTTGAAAGTAATGCATGCCTATGTGGATTCTTTTGACTTTCAAGGGATGCAATTTGATGAGGCAATCAGGGTTCTCCTTCAGGGATTTAGACTGCCTGGTGAGGCCCAAAAAATTGATCGAATCATGGAGAAGTTTGCCGAACGTTATTGCAAATGTAATCCAAAAGTTTTTTCCAGTGCTGATACAGCTTATGTCCTTGCTTATTCTGTGATCATGCTCAATACTGATGCTCACAATCCAATGGTGAAGAACAAGATGTCTGCTGATGATTTCATTAAAAACAATCGTGGAATAGATGATGGAAAAGATGTGCCAGAGGAATACTTGAGGTCCTTGTACGAGAGAATATCTAAAAATGAGATCAAAATGAAAGATGTTGATTTGGAAACCCAACAAAGACAAGCTGTGAATCCTAATAGACTGTTGGGTTTGGATAGTATTTTGAACATTGTGATCCGTAAGCGTGGGGAAGACAGTACTATGGGGACTAGTGATGATTTAATCCGACGTATGCAAGAACAATTCAAAGAAAAAGCTCGCAAGACAGAGTCAGTCTATTATGCTGCCACGGATGTCGTAATTCTTAGATTCATGATTGAAGCCTGCTGGGCTCCGATGTTAGCTGCCTTCAGTGTTCCTCTTGATCAAAGTGATGATGAAGTTGTAATATCTCTCTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACTTCTGTAATGTCCATGAAGACTCATAGAGATGCTTTTGTAACCTCATTGGCAAAGTTTACTTCCCTGCATTCTCCTGCTGATATTAAGCAGAAAAATGTAGACGCAATCAAGGTCATAGTTACTATTGCTGACGAGGATGGGAATTACTTACAAGAAGCATGGGAGCATATTTTGACCTGTGTTTCCCGATTTGAGCATCTACATCTTCTTGGAGAGGGCGCTCCTCCAGATGCGACATTCTTTGCTTTTCCTCAGAATGATTCTGAAAAAACAAAGCAAGCAAAATCAACTATTCTTCCTGTCTTGAAGAAGAAGGGACCTGGGAGAATGCAGTATGCAGCTTCCACGGTAATGAGGGGTTCATATGATAGTTCTGGAATTGGCAGTAATGCTTCTGGAGCTGTCACGTCGGAACAGGTGAACAGTCTAGTTTCTAATTTGAATATGTTGGAACAAGTTGGAAGCTCGGAAATGAACCGCATATTTACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTTAAGGCTCTATGCAAGGTCTCCATGGAGGAATTGAGATCTCCCACTGATCCACGGGTGTTCAGTCTTACAAAAATAGTTGAGATTGCGCATTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGTATTTGGCATGTTCTCTCAGATTTCTTTGTAACCATTGGCTGTTCCGGAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTAGAGCGGGAAGAGTTGGCTAACTATAATTTTCAGAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGAAGGAGTAGTGCTGTTGAAATTAGAGAACTTATCATCAGATGTGTCTCTCAAATGGTATTCACAACAGCGGCATATGATGACCACAGAAATATTGTACTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGTGATTACTTCCCCTACATCACCGAGACAGAAACCACCACCTTTACAGATTGTGTGAATTGTCTGATTGCATTCACCAATAGTAGATTTAACAAAGAGATTAGCTTAAATGCCATTGCTTTTCTTCGAGTCTGTGCAACTAAACTAGCAGAAGGAGACCTTGGTTTTTCATCAAGGAATAAGGACAAGGAAACTTCTGGAAAGATTTTGTCACCATCACCTCGAACAGGAAAAGAGGGAAAACTTGAAAATGGAGATTTAACAGACAAGGAAGATCATCTCTATTTCTGGTTTCCTTTATTGGCCGGTTTGTCTGAGCTTAGCTTTGATCCAAGGCCCGAGATTAGGCAGAGTGCCTTGCAAATCAATGAATTGGAGATTGATGGTGAGCTTGATCAAGATGCATGGCTTTATGAAACATGCACACTAGCCCTCCAATTGGTGGTAGATCTTTTTGTCAACTTCTACAGCACTGTCAATCCTCTTTTAAGAAAGGTGCTGATACTCCTTGTTAGCTTTATAAAGCGCCCACATCAAAGCCTTGCTGGCATTGGTATTGCTGCATTTGTTCGTTTGATGAGTAATGCTGGAGAGCTATTTTCAGATGAGAAGTGGTTAGAAGTGGTTTTGTCACTAAAAGAGGCTGCAAATGCAACACTACCTAACTTTTCATTCCTTGACAGTGGAGACTCCGTGATTATAAATGATCAGCGTGCTTCAACAGCTGAAGAAGATAATGATCCTGCTGATGAGTCTAGCTCACCCAATAATTTAGAAAGCTTTAGAACTCGTCGTCTTCATGCATATTTATCTGATGCAAAATGCCGAGCTGCTGTTCAGCTTTTATTGATTCAGGCGGTGATGGAGATATACAACATGTACCGTCCTCAACTTTCAGCAAAATCAATTCTTGTCCTGTTTGATGCTTTGCATGATGTGGCATCACATGCACACAAGATTAACAGCAATATTATTTTGCGCTCAAAGTTGCAAGAGTTTGGTTCAATGACCCAAATGCAAGACCCTCCGCTGTTACGCCTTGAGAATGAGTCCTACCAAATATGCCTCACATTTTTACAGAACCTACTTGTTGACAGGCCTAATGAGGCCGCTGAGGTGGAGACTCATTTGGTCCGGCTTTGTCAGGAGGTCTTGGAGTTCTACATTAAAGTTGCAGGTTCTGGACAAGTATCTGAATCTTCTCGTGGTGCACAACAACATTGGTTAATTCCTTTAGGCTCTGGTAAGCGAAGAGAACTAGCTACACGCGCACCTCTCATTGTGGCTGCTATCCAGGCTATTTGTAATTTGGGAGATGTGTGCTTTGAGAAGAATCTGGCTCAGTTTTTTCCCCTTTTCTCAAGCTTGATAAGTTGCGAACATGGGTCAACTGAGGTCCAGGTAGCACTCAGCGACATGCTTAGTTTATCAGTTGGTCCTGTTTTGCTACGGTCATGTTGA 5196 0.439 MASSEADSRLVQVIIPALEKIIKNASWRKHAKLAHECKSVIETLTSPQSQQQQSNPQSPGSEDGAADPEASVPGPLNGGGAIEYSLAESESILRPLINAANSGVLKIAEPAVDALQKLIAHGYLRGEADPAGGCPEAKLLANLIESVCKCHDLGDDAVELLVLKSLLSAVTSISLRIHGDCLLLIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMAPVEKSDADNSITQSVQGFITKVMQDIDGVLNPATPSSRVSALGGHDGAFETTTTATVETTNPADLLDSSDKDMLDAKYWEISMYKTALEGRKGELVDGEVVERDDDMEIQIGNKLRRDAFLVFRALCKLSMKTPPKEASADPQLMKGKIVALELLKILLENAGAVFRTSDRFLDAIKQYLCLSLLKNSASNLMIVFQLSCSIFISLVARFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCDDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGIPPGVTTTVLPPQEETLKLEALKCLVAVLKSMGDWMNKQLRIPEPLSSKKVEAVDNGHEAGGHPMVNGNGEESAEGSETHSEISNDASDVSTIEQRRAYKLELQEGISLFNRKPKKGIEYLINANKVGNSPEDIAAFLKDASGLNKTLIGDYLGERDEMSLKVMHAYVDSFDFQGMQFDEAIRVLLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIKNNRGIDDGKDVPEEYLRSLYERISKNEIKMKDVDLETQQRQAVNPNRLLGLDSILNIVIRKRGEDSTMGTSDDLIRRMQEQFKEKARKTESVYYAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVVISLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKVIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKQAKSTILPVLKKKGPGRMQYAASTVMRGSYDSSGIGSNASGAVTSEQVNSLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPTDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRRSSAVEIRELIIRCVSQMVFTTAAYDDHRNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRVCATKLAEGDLGFSSRNKDKETSGKILSPSPRTGKEGKLENGDLTDKEDHLYFWFPLLAGLSELSFDPRPEIRQSALQINELEIDGELDQDAWLYETCTLALQLVVDLFVNFYSTVNPLLRKVLILLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVLSLKEAANATLPNFSFLDSGDSVIINDQRASTAEEDNDPADESSSPNNLESFRTRRLHAYLSDAKCRAAVQLLLIQAVMEIYNMYRPQLSAKSILVLFDALHDVASHAHKINSNIILRSKLQEFGSMTQMQDPPLLRLENESYQICLTFLQNLLVDRPNEAAEVETHLVRLCQEVLEFYIKVAGSGQVSESSRGAQQHWLIPLGSGKRRELATRAPLIVAAIQAICNLGDVCFEKNLAQFFPLFSSLISCEHGSTEVQVALSDMLSLSVGPVLLRSC 1731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02561 1731 MobiDBLite consensus disorder prediction 1304 1328 - -
Aip04g02561 1731 MobiDBLite consensus disorder prediction 582 617 - -
Aip04g02561 1731 Gene3D - 619 700 - -
Aip04g02561 1731 SUPERFAMILY ARM repeat 387 1366 IPR016024 -
Aip04g02561 1731 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 223 IPR032629 -
Aip04g02561 1731 CDD Sec7 626 808 IPR000904 GO:0005085|GO:0032012
Aip04g02561 1731 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 355 513 IPR032691 -
Aip04g02561 1731 SUPERFAMILY ARM repeat 1082 1712 IPR016024 -
Aip04g02561 1731 MobiDBLite consensus disorder prediction 44 61 - -
Aip04g02561 1731 MobiDBLite consensus disorder prediction 1483 1502 - -
Aip04g02561 1731 Pfam Sec7 domain 627 808 IPR000904 GO:0005085|GO:0032012
Aip04g02561 1731 Gene3D - 701 820 IPR023394 -
Aip04g02561 1731 Pfam BIG2 C-terminal domain 1524 1720 IPR046455 -
Aip04g02561 1731 Pfam Domain of unknown function (DUF1981) 1177 1224 IPR015403 -
Aip04g02561 1731 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 1374 1724 - -
Aip04g02561 1731 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 10 1367 - -
Aip04g02561 1731 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 1374 1724 - -
Aip04g02561 1731 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 10 1367 - -
Aip04g02561 1731 SMART sec7_5 623 808 IPR000904 GO:0005085|GO:0032012
Aip04g02561 1731 MobiDBLite consensus disorder prediction 44 74 - -
Aip04g02561 1731 ProSiteProfiles SEC7 domain profile. 619 806 IPR000904 GO:0005085|GO:0032012
Aip04g02561 1731 SUPERFAMILY Sec7 domain 623 815 IPR035999 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02561 Aip-Chr4 113037116 113046340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02561 K18442 - gmx:100789988 2959.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02561 04 113037116 113046340 Aip04g02561 04 113037116 113046340 ECH
Aip04g02561 04 113037116 113046340 Aip02g02669 02 102144070 102153850 PCT