Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02480 ATGGGGAACTGTTTGGATAAGGATGAATCTACGGATACACATTCTGATCAACATGTGGAGTTAGCTTCTGGAAATGTGAAACTTATTAGCAGCACCGAAGCTTGGGAGCAAAAGTTGGAAGAAGCAACGAGAGATGGCAAAACTGTGATCCTGAATTTCAGTGCTACTTGGTGTGGTCCTTGTAAAATGATTGCGCCGTATTACTGCGAGTTATCTGAGAAATTCACATCGATAGTGTTCTTAATAGTCGATGTGGATGAACTAAGCGACTTCGCCGCTACATGGGACATCAAAGCCACGCCAACTTTCTTCTTTTTTCAAAATGGACAACAAGTTGACAAACTTGTAGGAGCAAACAAGCCAGAGCTGCAGAAGAAGATTGCTGCCATTACCGATTCGGTTCCAAAGTGGCAGTAA 417 0.4293 MGNCLDKDESTDTHSDQHVELASGNVKLISSTEAWEQKLEEATRDGKTVILNFSATWCGPCKMIAPYYCELSEKFTSIVFLIVDVDELSDFAATWDIKATPTFFFFQNGQQVDKLVGANKPELQKKIAAITDSVPKWQ 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02480 138 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Aip04g02480 138 Pfam Thioredoxin 31 128 IPR013766 -
Aip04g02480 138 PANTHER THIOREDOXIN H9 1 136 - -
Aip04g02480 138 SUPERFAMILY Thioredoxin-like 20 131 IPR036249 -
Aip04g02480 138 CDD TRX_family 39 128 - -
Aip04g02480 138 PANTHER THIOREDOXIN 1 136 - -
Aip04g02480 138 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Aip04g02480 138 Gene3D Glutaredoxin 1 136 - -
Aip04g02480 138 PRINTS Thioredoxin family signature 49 57 - -
Aip04g02480 138 PRINTS Thioredoxin family signature 57 66 - -
Aip04g02480 138 PRINTS Thioredoxin family signature 96 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02480 Aip-Chr4 111084737 111087464 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02480 K03671 - gmx:100813401 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02480 04 111084737 111087464 Aip04g02480 04 111084737 111087464 ECH
Aip04g02480 04 111084737 111087464 Aip02g00621 02 9311467 9313964 PCT