Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02403 ATGGAGGAAGAAGAACCAGTGAAAACGACGACGCATCAACATGAACCTCGAAAGTGTTCTGAGAAGAAGACCGTGAGTGTGAGTGTGAGGGGTGAGATTGATACTTCTGTGCCCTTTGAATCTGTGAAGGAGGCAGTTACTCGATTCGGTGGCATCGGTTTCTGGAAGCCTATTATTCCTTCTCTTCCGCTTCCTTTTCATTCTCACCATCAGCACGGCGGAGAAGAGGTGGACGGTGCAAAACTGGAGGAGCAGGCCATGGTGTTGGAGAAAGAATTGATCCTCAAAGAGAGGGAAACTCTTGATGTGTTAAAGGAATTGGAGAGTACCAAAAGGCTTGTTGAAGATTTGAGAACAAAGCTACAGAAGGAGGAAGCCGAAGCCAAAGAGAATGAAGAAAATGTGTTGGATGTTAGAAAGCAACAAGCTTCTAAGGAAGGTTTTATTCCCTGCCCTTCGTCTTCTCCGGCTTTGATACTAATGGAATTGAAGCAGGCCAAGTTGAACCTAACAAGAACTACTAATGATCTTGCTGATGTTCGAGCTTCTGTCGAATCGCTTAATAAGAAATTAGACAAGGAAAGAATCTCGCTTGAGAGAACCCGCGAGAGGCTTAGTCAGAATTCATTGAAAATATCTTCTCTTGAAGAAGAACTTAAACAGACCAGACTTAGAATAGAACTGGCAAAAGATGCTGAAATCAAGTGTGTTTCCGGTGACCCTTCGGATATCACGAGAGAGCTCCATCGATTGAGTTCTGAGACAGAGCATTTCAAGAAAATTGGAGAAGCCGCCAAGTCAGAAGTTTCGAGGACAATGTCTGAGATTGAACAGACTAGAAGTATGATAACAACTGCAGAAATTAGATTGGTTGCTGCCAGGAAAATGAAGGAAGCTGCTAGAGCCGCTGAAGCAGCTGCCATTGCAGAAATCAATGCTTTATCTAATCATGAGATTGAGAATTCACCCGAAAAGCATGATGGTGTTACTCTTTCATTTGAAGAGTATACTTCTCTTGCCTGCAAAGCTCAAGATGCTGAGGAACAATACAAGAAGAAAGTTTTCAGTGCCATGCTTGAAGTTGATGAGGCGAATTTGGAAAAAGAGAAAATCTTAAAGAAGGCAGAGGAAGCTTTGGAAGAATTGAAATCCAGCAAGAAGGTCCTTGATGAAGCTTTGGAAAGGGTCGAGGTGGCGAATAGAGGGAAGCTAGTGGTAGAGGAGGCTCTAAGGAAGTGGCGGTCCGAGAGTCACAAGAGACGCTCCTCGGTACAAAATTCTACCAAGTTCAAGACCTCTTATCCATCTCACCATCAGAGAGAATCAATATTACTTGATGTGAATGGATTGAATATTGTAAATGATGAAACCAAGCCGGTTCTTAAGCCAACGCTATCAATAGGACAAATACTGAGCCGGAAGCTGCTTCCGCCACAAGATATTGAATCCATGTTGCCTGGAGAAAAAAGCTCTGTGAAAAGGAAGATGTCATTGGGTCAGATGCTTGGCAAACAAAATTCTGATTCATCCATTGATACACAAATTGAGAAAGAAAATGGACAGAAGCAGTTTTCTTCCAAGAGAAAGAAATTTGGGTTTGTGAGATTCTCACTTCTCTTGTCTAAACAACAAAAGAAGAAGAAGAAGAAGAAGCCAATGTTGAATTTGAGGTGA 1674 0.4241 MEEEEPVKTTTHQHEPRKCSEKKTVSVSVRGEIDTSVPFESVKEAVTRFGGIGFWKPIIPSLPLPFHSHHQHGGEEVDGAKLEEQAMVLEKELILKERETLDVLKELESTKRLVEDLRTKLQKEEAEAKENEENVLDVRKQQASKEGFIPCPSSSPALILMELKQAKLNLTRTTNDLADVRASVESLNKKLDKERISLERTRERLSQNSLKISSLEEELKQTRLRIELAKDAEIKCVSGDPSDITRELHRLSSETEHFKKIGEAAKSEVSRTMSEIEQTRSMITTAEIRLVAARKMKEAARAAEAAAIAEINALSNHEIENSPEKHDGVTLSFEEYTSLACKAQDAEEQYKKKVFSAMLEVDEANLEKEKILKKAEEALEELKSSKKVLDEALERVEVANRGKLVVEEALRKWRSESHKRRSSVQNSTKFKTSYPSHHQRESILLDVNGLNIVNDETKPVLKPTLSIGQILSRKLLPPQDIESMLPGEKSSVKRKMSLGQMLGKQNSDSSIDTQIEKENGQKQFSSKRKKFGFVRFSLLLSKQQKKKKKKKPMLNLR 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02403 557 Pfam Weak chloroplast movement under blue light 31 133 IPR008545 -
Aip04g02403 557 Pfam Weak chloroplast movement under blue light 161 420 IPR008545 -
Aip04g02403 557 Coils Coil 79 99 - -
Aip04g02403 557 Gene3D - 158 327 - -
Aip04g02403 557 Coils Coil 163 232 - -
Aip04g02403 557 Coils Coil 104 141 - -
Aip04g02403 557 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 12 549 - -
Aip04g02403 557 MobiDBLite consensus disorder prediction 1 23 - -
Aip04g02403 557 MobiDBLite consensus disorder prediction 416 435 - -
Aip04g02403 557 Coils Coil 361 399 - -
Aip04g02403 557 PANTHER MYOSIN HEAVY CHAIN-LIKE 12 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02403 Aip-Chr4 109190343 109192747 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02403 - - aip:107639604 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02403 04 109190343 109192747 Aip04g02403 04 109190343 109192747 ECH
Aip04g02403 04 109190343 109192747 Aip02g02465 02 98422858 98425586 PCT