Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02310 ATGCCAATTTCGAGGTTCCACATTCGGAGCGAGCACAGCTTGGCCGATCCGGAGCTCCACCGCGCCGCCGATAAGGATGATCCCGAGGCTCTCCTCGAAGCCGTCGCCATGGCTGGACTCGTCGGAGTCCTTCGCCAGCTCGGTGACCTTGCTCAGTTTGCTGCCGAGATCTTCCATGACTTGCATGAAGAAGTAATGGCCACTGCCGGGAGAGGCCACAGTCTTATTTCTCGTGTTCAGCAACTTGAAGCTGAAGTTCCTGCACTCGAGAAAGCTTTTTTGTCACAAACTCGTCATCATTCATTCTTTACAAATGGAGGGATTGAATGGCATCCTAATCTCCGATCTGAACAGAATCTTGTTACTCGTGGAGACTTGCCTCGATTTATAATGGATTCGTATGAAGAATGTCGTGCTCCCCCAAGGCTGTTCCTTCTAGACAAGTTTGATGTGGCTGGGGCTGGGGCATGTCTGAAGCGGTATACTGATCCATCATTCTTTAAAGTGGAGTCCTCTGTAACAACAGTAGAAGTTCACAGGGAAAAAAGGATTCATAAGGTCAAGCAGAAGAAAGTATCAAAACCAGGGAATGGTACAAAACCTGAAGTTGTCTCATCCCATGCCAAACTGCACCAGTTGTTCCTTGAGGAGCGCATTGAGAATGCTTGCAATGATCCTGCACGTCTTGTGAAGTTGAAGAAAAAACAGTTGAATGGATCGGCAGTAGATTCAAAGACTGGGAAAAGTTATATGGAGAAGATTTTTGAGAATTCCTCACCAGATCATAAAATGGTTTGTGAGGCCTCGATCACTCCACACCCACTGAGATCAATGTTTGATGCTGATGACAATGGGATTACAGTACTTGAAATCAGTAGTCTTAGCTCTGTGAAAAGGTCACCAGGATATGAAAGCAAAAGATCATCACCACTCAATGGGCAGGAATTAGAACTGAAACCATACTCTGAAATTGATAGGGTGAGGAATGGAGATTTTGTGCAAGTGCATGAAGATGTCTTAGGAGCCGTGACACATAAAACGCCTTTAAATCATCCCAAGGTACCTGATGAGAGACAATTGGTAGTTGATGAACAAAAGAACAGAGAATGCATCTTGGATGGTTACCATTCTGATGATGTGACTAGCGAGGTTGACGATTACATGGATGCCTTAGCTTCCATCGAAGAACTGGAAACAGAAATTGAGTGTAGACCAAAGAAAAGCTTATTCCATATTCAAAAGACAAGTGATTCAAATGGCAAAGAAGAACATCAACTGCAAGGTCAATTTTCAGATTCTCAATCATTTGGGGACTCCTTGACATCTGAAGAAATTGATTCAGTTGATCAAGATCGAAATGATGAACGTACCGAAGTGCAAGCTCAGCTATCAGATTCTCAATCAACACGAAGCTCCAATGCATCAGATGATAGCAGATCATCCAGAAGAGTCAGAATTGCTGAACGCACCCAACTGCAAACTCCGTTTTCAGATTCTCAATCTATTGGAAACTCCTCCATATCAGAGATTGAATATATGCCATCCAACCAGCTTGACCAAAATGTTGAGTTGCAAAGTACTCATTGTGGTGGGTTTGTCATGCATGACAAAGGACATGTTTATGGAGAAGATATCTCTGGTTTTGGACCAGATGCTTCTGTTTCATGTCTAATGGATTCAGGACATTCATTGTTATCTTTAGATCCTGGGCCCCTCTCCTCAATGTGCCTCCCTATAAGGACTCAATCTGGTGAAACACAATCTGGCCCTGTTGAAACTCATCAAAGCTTAGAAGATGATGAAGACAGGAAGTCACTTGTTGAATCTGTGATGAAAGATGATGCTTGCTCTATTGTTTCTTCCAATAACAAATCTCTGGATAGCTTGGATGTTTGTGATCCATGTGTTAGTTCCAATGCTTTAGAAGTTTTTAATGATTTGAACTTGGCACAGGAAGATGAATATGGTAATCATTCTGCAATAACAGTATTGCAGGAAGAATCTGCTAATAAATACTCTTCTGCAATTTCGGATTCCGGTGATATGGGTTTTCAAGGAGAGAATCCAATTTTCCCATCCATGAAAGCAGACTTGAATTTGGGTACCAAGTTGGCACTTGGCGGCAGAGACTTTAATTCTGAGAATGGTGTAAATGAAATCCAACACATCTCAGAGGATTTGTCTCCTGCTTTGGAGACTCCACAAATAAGTAACATTACAGAGGAACTATCGGATTTTACTCTAAATCAACAGGATGAGCCACATTCAGCAGAATCTGAAGTTTTCTGTTCTGAGCAGCAATCAACTTTTGAAGACATACAAAGGATGCTGCTTGCTGATGAAAAAGGTGGATCCAAAGTTGAAGATGATGTTCATATTAAATATCTGGTAAATAAATTGGAATCGTCTTCAGACCTCATATCATCTCCAGCTAAAAGGCTTACAGATTTGGAAGAATCTACATTTGCAGATTCTCACGAGAAAGAAATGGAAGTCAATGAGGTACTTCCTCACAAATATTTGACAGCCTTAGTGGCACCAAGGGTGGTGGATCAACTTGAAATTGGTGCTGCTGACATACAATCAAATCCGAACAGATCTGTACCCTGTGATCCATGTCATTCTGAAATATGTAACAATATCCAAGAGGAGAGAATTCAAAATCTTTCTGCTGTCAGTGAAATGAAAGTGGTGGATTCAAGTTCAGAGCTAGACTCTGAGAGGTCAGAATCTTCATTTTTGCAGGAGACCAGTCCTACCAAGCATGTCATGCATTCATTGCATCCCCTGATTCCGGAGTTAACCAATAATCATGAGGAGATACCTCCTATGCCCCCTTTACCACCAATGCAGTGGAGAATGAGCAAGGTTCAACATTCTTCCCTAGTTTCACAGAGGGAAGAAATAGAAGCAACTCATGCATCATTGCAACCAATACAGCCAGTTAAACCTAATGATAAGTCTCAGTTTGGTTTATCAACCTCTGATAGAGACACTATACTGTATCAAAATCCATTTTTGCCTGTCATGGCTGTGGAAAGCAGTAAACTCCAGCGTTCTCCTGGGTTCTTAGCTGGTTTACCAGAGCATTCAGTTGCTATTCCCTTGCAATTTCCTATCATGATAAATAAATCAAATAGTCAATATAATTACCTGGTTATGGATAAAAGCCACCATCAGAACCCATTCTTAACACTACCTGTGGTATCTACGAGCAGGCCTCCACATGGATATGTCAAGGATGAATCTGGAGAATCGCATTTGATGCCACCTACTGAACTTGCTGCTTCTGGAAATGATCTCACCTCAGCAAGAGAACTTATCACCCCAAGACAATTAACAGAAGAGACTAGTAGCTTAGAAGTTAAAACATTTGAGCAGTCTTCGATTTATTCAGAAAGGAAACAGGGAGATCCCTCTATCTCACCAATGGCACCACCAGGCATAGAAGTTGGGCAGCCCAATGACAGTCTGTTGCCTTCAAAGGGGGGAACGACATTGCCATTGGATAAATCTTCCCGAACACCAGAGTTTGATAATAAAATGCCAAATGGAAAGCCGAAGAATAAGGTTGTTCGTCCTGAGAGTCCTATAATTGATATTGCTGCTGCTCTTGACAGAAGCAAGCTGAGAAAAGTTTCGGAACGGGTTATTCCTCCAAAACCACCCAAGTTAGATGAAAGAGATTCATTGTTAGAGCAGATAAGATCAAAGTCCTTCAACTTGAGACCTGCTGCAGCTACACGACCCATCATGCAGGGTCCAAAAACAAATTTGAGGGTTGCTGCCATCTTGGAGAAAGCAAATTCAATTCGCCAGGCATTGGCTGGAAGTGATGAAGATGATGATACAGATAGTTGGAGTGATTCTTGA 3873 0.4214 MPISRFHIRSEHSLADPELHRAADKDDPEALLEAVAMAGLVGVLRQLGDLAQFAAEIFHDLHEEVMATAGRGHSLISRVQQLEAEVPALEKAFLSQTRHHSFFTNGGIEWHPNLRSEQNLVTRGDLPRFIMDSYEECRAPPRLFLLDKFDVAGAGACLKRYTDPSFFKVESSVTTVEVHREKRIHKVKQKKVSKPGNGTKPEVVSSHAKLHQLFLEERIENACNDPARLVKLKKKQLNGSAVDSKTGKSYMEKIFENSSPDHKMVCEASITPHPLRSMFDADDNGITVLEISSLSSVKRSPGYESKRSSPLNGQELELKPYSEIDRVRNGDFVQVHEDVLGAVTHKTPLNHPKVPDERQLVVDEQKNRECILDGYHSDDVTSEVDDYMDALASIEELETEIECRPKKSLFHIQKTSDSNGKEEHQLQGQFSDSQSFGDSLTSEEIDSVDQDRNDERTEVQAQLSDSQSTRSSNASDDSRSSRRVRIAERTQLQTPFSDSQSIGNSSISEIEYMPSNQLDQNVELQSTHCGGFVMHDKGHVYGEDISGFGPDASVSCLMDSGHSLLSLDPGPLSSMCLPIRTQSGETQSGPVETHQSLEDDEDRKSLVESVMKDDACSIVSSNNKSLDSLDVCDPCVSSNALEVFNDLNLAQEDEYGNHSAITVLQEESANKYSSAISDSGDMGFQGENPIFPSMKADLNLGTKLALGGRDFNSENGVNEIQHISEDLSPALETPQISNITEELSDFTLNQQDEPHSAESEVFCSEQQSTFEDIQRMLLADEKGGSKVEDDVHIKYLVNKLESSSDLISSPAKRLTDLEESTFADSHEKEMEVNEVLPHKYLTALVAPRVVDQLEIGAADIQSNPNRSVPCDPCHSEICNNIQEERIQNLSAVSEMKVVDSSSELDSERSESSFLQETSPTKHVMHSLHPLIPELTNNHEEIPPMPPLPPMQWRMSKVQHSSLVSQREEIEATHASLQPIQPVKPNDKSQFGLSTSDRDTILYQNPFLPVMAVESSKLQRSPGFLAGLPEHSVAIPLQFPIMINKSNSQYNYLVMDKSHHQNPFLTLPVVSTSRPPHGYVKDESGESHLMPPTELAASGNDLTSARELITPRQLTEETSSLEVKTFEQSSIYSERKQGDPSISPMAPPGIEVGQPNDSLLPSKGGTTLPLDKSSRTPEFDNKMPNGKPKNKVVRPESPIIDIAAALDRSKLRKVSERVIPPKPPKLDERDSLLEQIRSKSFNLRPAAATRPIMQGPKTNLRVAAILEKANSIRQALAGSDEDDDTDSWSDS 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02310 1290 MobiDBLite consensus disorder prediction 422 443 - -
Aip04g02310 1290 MobiDBLite consensus disorder prediction 460 475 - -
Aip04g02310 1290 Gene3D - 1201 1289 - -
Aip04g02310 1290 Gene3D - 104 247 - -
Aip04g02310 1290 ProSiteProfiles WH2 domain profile. 1227 1245 IPR003124 GO:0003779
Aip04g02310 1290 PANTHER WASP-1 1080 1290 IPR028288 GO:0005856|GO:0030036
Aip04g02310 1290 MobiDBLite consensus disorder prediction 1114 1192 - -
Aip04g02310 1290 MobiDBLite consensus disorder prediction 1174 1188 - -
Aip04g02310 1290 Gene3D - 1 90 - -
Aip04g02310 1290 MobiDBLite consensus disorder prediction 901 921 - -
Aip04g02310 1290 MobiDBLite consensus disorder prediction 1158 1173 - -
Aip04g02310 1290 MobiDBLite consensus disorder prediction 581 602 - -
Aip04g02310 1290 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1080 1290 - -
Aip04g02310 1290 MobiDBLite consensus disorder prediction 1114 1136 - -
Aip04g02310 1290 MobiDBLite consensus disorder prediction 445 459 - -
Aip04g02310 1290 MobiDBLite consensus disorder prediction 1081 1100 - -
Aip04g02310 1290 MobiDBLite consensus disorder prediction 414 503 - -
Aip04g02310 1290 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 1098 - -
Aip04g02310 1290 PANTHER WASP-1 1 1098 IPR028288 GO:0005856|GO:0030036
Aip04g02310 1290 MobiDBLite consensus disorder prediction 487 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02310 Aip-Chr4 105733162 105740074 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02310 - - ahf:112743748 1597.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02310 04 105733162 105740074 Aip04g02310 04 105733162 105740074 ECH
Aip04g02310 04 105733162 105740074 Aip02g02424 02 97507274 97516133 PCT