Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02307 ATGGATAGTAGCAGTGGAATTGAGAGCAATGGGCGTGTGCCACTTTCAGGGGTTGTTGCAGATTGTGTGAAACGGTGGTTCAGAGACACTCTGAAAGAAGCTAAAGCTGGGGACATAAACATGCAGGTCTTGGTAGGTCAGATGTATTACAGTGGTTATGGTGTTCCCAGAGATGACCAGAAGGGTAAAATTTGGTTGACTAGAGCATCGAGGGTTAGATCTTCAGTTTGGAAAGTTGGTGATAAGCATCCAGGTTATAATGCAAGTGATTCTGATTCTGATGAATTGAAGGAAGATTCTTAA 303 0.429 MDSSSGIESNGRVPLSGVVADCVKRWFRDTLKEAKAGDINMQVLVGQMYYSGYGVPRDDQKGKIWLTRASRVRSSVWKVGDKHPGYNASDSDSDELKEDS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02307 100 SUPERFAMILY HCP-like 32 71 - -
Aip04g02307 100 Gene3D Tetratricopeptide repeat domain 19 87 IPR011990 GO:0005515
Aip04g02307 100 PANTHER EXPRESSED PROTEIN 1 100 - -
Aip04g02307 100 SMART sel1 39 74 IPR006597 -
Aip04g02307 100 MobiDBLite consensus disorder prediction 81 100 - -
Aip04g02307 100 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02307 Aip-Chr4 105706272 105707388 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02307 - - gmx:100527576 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02307 04 105706272 105707388 Aip04g02307 04 105706272 105707388 ECH
Aip04g02307 04 105706272 105707388 Aip02g02423 02 97494570 97499491 PCT