Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02249 ATGAAATTGGCAAAGGTACAACCAATAGTACTAGTAGGGGGGAGCAACACTTGGGGAATTAGAAACACCTTTCATTCTCTTTTGGCCATTCTTACCACTCTTTTAGTCATTAGTTTCATTTATATAAAACAAGACAATGGAACACAGTTATCATCATCATCACCACCCCAAGAACATGAAGAAATGATAGATGCCTCTCAGGATGATGACACTCATAATAATGTGTCATCATCTAAATGTGACTTGTTCAATGGGAAATGGGTTTTTGACAATAAGTCTTATCCATTATACAAAGATAAGGAATGCAAGTTCATGTCTGATCAATTGGCATGTGAGAAGTTTGGAAGGAAGGACTTGAGTTACCAGAATTGGAGGTGGAAGCCAAACCATTGTGATCTACCAAGGTTCAATGCCACAGCATTGCTTGAGAGGCTAAGGAACAAGAGGCTTGTGTTTGTGGGGGATTCACTCAACAGAGGCCAATGGGTTTCCATGGTTTGCCTTCTTCACACTTCCCTCTCATCCTCAACTCACACTTCCATGCACAACACTGCTAATGCCTCTCTTAACATTTGGAAGGTCACAGAATACAATGCAACAATTGAGCACTATTGGGCACCATTGCTAGTAGAATCAAATTCAGATGATCCAGTGCACCATAGAGTAATAGAAAGAACTGTGAGAGTGAATGCAATTGAGAAGCATGCTAGGTATTGGACTCATGCTGACTTTATTGTCTTCAACACTTACCTCTGGTGGAGAAGGCCTCTTATGAATGTTTTGTGGGGAACATTTGGAGACCCAAATGGAGTTTACAAAAAAGTGGAAATGCTAAGAGTTTATGAGATGGCATTGAGAACATGGTCAGATTGGTTGGAGGTCCATGTTAATCGTAACAAGACACAGTTATTTTTTGTTAGTATGTCACCAACTCATGAAAGGGCTGAAGAATGGGGAGCAGATAAGGGTGACAATTGTTACAAAGAAACAGAAATGATCACAGAAGAAGGGTATTGGGGTAAAGGGTCAGATCCAAAAATGATGAAAGTGGTGGAAAATGTGGTTGAAGACTTGAAAACAAGAGGATTGAATGTTGAAATACTTAACATCACTCAGCTCTCAGAGTACAGAAAAGAAGCACACCCTTCTATATACAGAAAGCAGTGGGAGCCTCTAACACAAAAACAGATACAAGATCCAAATAGCTATGCAGATTGCATACATTGGTGCCTTCCTGGAGTTCCTGATGTGTGGAATGAGATACTTTATGCCTATCTTTTCCAACAATGA 1290 0.4 MKLAKVQPIVLVGGSNTWGIRNTFHSLLAILTTLLVISFIYIKQDNGTQLSSSSPPQEHEEMIDASQDDDTHNNVSSSKCDLFNGKWVFDNKSYPLYKDKECKFMSDQLACEKFGRKDLSYQNWRWKPNHCDLPRFNATALLERLRNKRLVFVGDSLNRGQWVSMVCLLHTSLSSSTHTSMHNTANASLNIWKVTEYNATIEHYWAPLLVESNSDDPVHHRVIERTVRVNAIEKHARYWTHADFIVFNTYLWWRRPLMNVLWGTFGDPNGVYKKVEMLRVYEMALRTWSDWLEVHVNRNKTQLFFVSMSPTHERAEEWGADKGDNCYKETEMITEEGYWGKGSDPKMMKVVENVVEDLKTRGLNVEILNITQLSEYRKEAHPSIYRKQWEPLTQKQIQDPNSYADCIHWCLPGVPDVWNEILYAYLFQQ 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02249 429 Pfam PMR5 N terminal Domain 79 132 IPR025846 -
Aip04g02249 429 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 133 424 IPR026057 GO:0016740
Aip04g02249 429 MobiDBLite consensus disorder prediction 48 72 - -
Aip04g02249 429 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 16 428 IPR029962 GO:0016413
Aip04g02249 429 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 16 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02249 Aip-Chr4 103305058 103309341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02249 - - gmx:100785941 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02249 04 103305058 103309341 Aip04g02249 04 103305058 103309341 ECH
Aip02g02365 02 96599875 96605454 Aip04g02249 04 103305058 103309341 PCT