Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02243 ATGGATCAGATTCTGAACAAAGTTGGGTCCTACTGGTTCAACCGCAAGGCTACCAAGCAACTTGACTCTGTTGGTGATGATATCAATTCACTGTCAGACAGTATTGGAGGCGGAACCCGATGGTTGGTGAACAAAATAAAAGGAAAGATGCAAAAGCCTTTGACTGAGTTGCTAAAGGAGTATGATCTTCCTGTAGGGATCTTTCCTCGTGACACAACGAACTACGAGTTCAATGAAGAAACAAGGAAGCTCGTCGTTTACATTCCTCAAGTGTGTGAAGTAGGCTACAAGGATTCGTCGGTCCTGCGTTTCACCACCACCGTGACTTGTTATCTCGAAAAAGGGAAGTTGGCGGATATAGAGGGAATGAAGACCAAAGTATTGATCTGGACTAAAGTGACCGCGATTTCATCAGAAGGATCAAAGCTCCATTTCACTGCTGGTATGAAGAAAACAAGGAGCAGAGAAGCATATGAGGTTTCAAGGGATGGTGTGACCGTAGAAAAATTCTGA 513 0.4405 MDQILNKVGSYWFNRKATKQLDSVGDDINSLSDSIGGGTRWLVNKIKGKMQKPLTELLKEYDLPVGIFPRDTTNYEFNEETRKLVVYIPQVCEVGYKDSSVLRFTTTVTCYLEKGKLADIEGMKTKVLIWTKVTAISSEGSKLHFTAGMKKTRSREAYEVSRDGVTVEKF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02243 170 PANTHER DUF538 FAMILY PROTEIN 3 170 - -
Aip04g02243 170 SUPERFAMILY At5g01610-like 2 169 IPR036758 -
Aip04g02243 170 Pfam Protein of unknown function, DUF538 55 159 IPR007493 -
Aip04g02243 170 Gene3D - 32 170 IPR036758 -
Aip04g02243 170 PANTHER T31J12.3 PROTEIN-RELATED 3 170 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02243 Aip-Chr4 103151242 103155045 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02243 - - ahf:112797091 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02243 04 103151242 103155045 Aip04g02243 04 103151242 103155045 ECH
Aip04g02243 04 103151242 103155045 Aip02g02361 02 96531002 96532726 PCT