Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02230 ATGGCTCTTACCTCTCCAAAATTTTCACCATTTTCAGTGTTTTCTTCTCTCTTAGAACCGACTCATTCTTCTTCTTCCTTGACGTTTGATTTCTCTTGTTTGAAATGGGGAAGCAGAGATGTGAGGGTGATGGCGTCAAGTAAGGCTCTGACTGGAGTGATATTCCAACCGTTTGAGGAAGTGAAGAAGAAATCAGTTGCTGTTCCAACAGCATCTCAAGTTTCACTTGCTCGTCAGAAATATGCTCATCAGTGTGAATCTGTTATTAATGAGCAGATCAATGTGGAGTACGTTGCTTCGTATGTGTATCATTCCATGTTTGCATACTTCGACAGAGACAATGTGTCTCTCAAGGGACTTGCCAAGTACTTCAGGGAATCTAGTGAAGAAGAAAGAGAACATGCTGAGAAGCTTATGAAATACCAGAACGTTCGTGGAGGAAGAGTCGTTCTTCACACCATCAAGGATGTTCCCTCAGAATTTGATGATGAGGAAAAGGGGGATGCATTACATGCTATGGAATTAGCTTTGTCTCTGGAGAAGTTAGTAAACGAGAAACTTCTGAATGTGTACAGTGTGGCCGACCGCAACAATGATCCTGAGATGGCAAACTTCATCCAAAACGAGTTTTTGAGTGAACAGGTGGAAGATATTAAGAAGAAAGCAGAGTATGTGTCACAATTGAGAAGGGTTGGAAAGGGTCACGGTGTTTGGCACTTTGATCAAAGGCTTCTTCATGACTAA 744 0.4194 MALTSPKFSPFSVFSSLLEPTHSSSSLTFDFSCLKWGSRDVRVMASSKALTGVIFQPFEEVKKKSVAVPTASQVSLARQKYAHQCESVINEQINVEYVASYVYHSMFAYFDRDNVSLKGLAKYFRESSEEEREHAEKLMKYQNVRGGRVVLHTIKDVPSEFDDEEKGDALHAMELALSLEKLVNEKLLNVYSVADRNNDPEMANFIQNEFLSEQVEDIKKKAEYVSQLRRVGKGHGVWHFDQRLLHD 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02230 247 Gene3D - 47 247 IPR012347 -
Aip04g02230 247 Pfam Ferritin-like domain 89 231 IPR008331 GO:0008199
Aip04g02230 247 ProSitePatterns Ferritin iron-binding regions signature 1. 130 148 IPR014034 -
Aip04g02230 247 PANTHER FERRITIN 1 246 IPR001519 GO:0006826|GO:0006879|GO:0008199
Aip04g02230 247 ProSiteProfiles Ferritin-like diiron domain profile. 79 232 IPR009040 -
Aip04g02230 247 PANTHER FERRITIN-1, CHLOROPLASTIC 1 246 - -
Aip04g02230 247 CDD Euk_Ferritin 83 242 - -
Aip04g02230 247 SUPERFAMILY Ferritin-like 70 245 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02230 Aip-Chr4 103018483 103023024 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02230 K00522 - gmx:547824 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02230 04 103018483 103023024 Aip04g02230 04 103018483 103023024 ECH
Aip04g02230 04 103018483 103023024 Aip02g02360 02 96516643 96519072 PCT