Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02208 ATGATCATTGTTGTAGCACAAACCCTTTTGATTTTCATGGATGAATCTAGTGGTGTTAATTCATACCCTTGTGATTCACATGATGCCAACATTGTTGATGAGACTAATATTATGAAAGTTAATCTCTCAGTGTACTATGGAAGCCTTTGCCAGCCATGTTCAACTTTCATTATTAAGAATCTCCAGGAAATATTCTACAATGGTCTTATCAACATTATCAATCTCCAACTCGTTCCTTGGGCCAATGCTTATATCAACAATGACACTAATAATTCCATAATTTGCCAGAATGGCCCAGATGAATGTGAGCTTAATTCGGTGGAAAGCTGTGCCATCAACATTTTGAATGATGTGAACAAATACTATGCTTTGATTGAGTGCTTGGAGCTTCTAGCAATTGAAAAAAGACAAAAGAATTGGGAGGAATGCTTCAACACATTAGGTTTGCCTAATGCTCCTATTCTCAAATGCCATAACACAGGAAATGGAACCGAGCTTGGACGAAAACATATTAATGAAACTGCACTTCTTCATTCACCTCACACATTGTTGCCAGTGGTGGTGGTAAACAATAAATCAATTGGAAAGGAATATGAAAATTTCACAAGCTACGTTTGTAATTCTTATAGAGGCTCTTCCATGCCAGAAGCATGCAAACATCATTAG 666 0.3694 MIIVVAQTLLIFMDESSGVNSYPCDSHDANIVDETNIMKVNLSVYYGSLCQPCSTFIIKNLQEIFYNGLINIINLQLVPWANAYINNDTNNSIICQNGPDECELNSVESCAINILNDVNKYYALIECLELLAIEKRQKNWEECFNTLGLPNAPILKCHNTGNGTELGRKHINETALLHSPHTLLPVVVVNNKSIGKEYENFTSYVCNSYRGSSMPEACKHH 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02208 221 Pfam Gamma interferon inducible lysosomal thiol reductase (GILT) 42 146 IPR004911 GO:0016671
Aip04g02208 221 PANTHER GAMMA INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE 4 219 - -
Aip04g02208 221 PANTHER GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT 4 219 IPR004911 GO:0016671
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02208 Aip-Chr4 102466378 102469185 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02208 K08059 - gmx:100306044 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02208 04 102466378 102469185 Aip04g02208 04 102466378 102469185 ECH
Aip04g02208 04 102466378 102469185 Aip02g02356 02 96475188 96478604 PCT