Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02057 ATGATGAGACAGAAACAAGGAGAGGAAGCAATAGTGAGCAACATGAGCGAAGTAGAGAATGAAGAACAGAATAATGATCAAGAAGAAAACCATTCCATGTTCAGTGTTAAGAGCTTCCTTTGGCATGGTGGCTCTGTTTGGGATGCATGGTTCAGCTGTGCCTCTAACCAGGTGGCTCAAGTGCTGTTGACACTGCCATATTCATTCTCGCAATTGGGGATGGTATCAGGAATAGTGCTTCAGGTGTTCTACGGCATCATGGGAAGTTGGACTGCATATCTCATTAGTGTCCTTTATGTCGAATATCGCTCCAGAAAGGAAAAGGAAAACGTTAATTTCAAGAACCATGTCATTCAGTGGTTCGAAGTTCTTGATGGGTTGCTAGGCAAATATTGGAAAGCATTGGGGTTAGCCTTCAATTGTACTTTCCTCCTCTTTGGATCAGTGATACAGCTTATAGCATGTGCAAGTAACATATACTACATAAATGACAAACTGGACAAGAGGACTTGGACTTACATATTTGGAGCTTGTTGTGCTACCACTGTCTTCATTCCTTCTTTCCATAATTACCGTATTTGGTCTTTTCTTGGACTTGGAATGACCACTTACACTGCTTGGTATTTAGCTATTGCTGCTCTTGTTCATGGCCAGGTAGAAAATGTGACACATTCAGGTCCAACGAAGCTAGTACTATACTTCACCGGAGCCACCAACATACTCTACACCTTTGGTGGACATGCAGTTACTGTAGAGATTATGCATGCGATGTGGAAGCCACAGAAGTTCAAGTACATATACTTGTTGGCTACATTGTATGTTTTCACATTAACGATTCCTTCAGCTGCTGCTGTTTATTGGGCTTTTGGTGATGAGCTTCTTAACCATTCCAATGCTTTCTCTCTCCTCCCAAAGAATGCTTTTCGTGATTCAGCTGTTATTCTCATGCTTATTCACCAGTTCATAACATTTGGATTTGCATGTACTCCATTGTACTTTGTGTGGGAGAAAGTAATTGGGATGCATGACACAAAGAGCATTTGTATGAGAGCACTAGCAAGGTTACCGGTGGTGATACCAATATGGTTCTTAGCCATAATATTCCCTTTCTTTGGTCCCATCAACTCTGCTGTTGGTGCTCTTCTTGTTAGCTTCACTGTCTACATCATCCCTTCCTTGGCTCATATGCTTACTTATAGAAAATCCTCTGCAAGACAGAATGCTGCAGAGAAGCCTCCTTTCTTCATGCCAAGCTGGACAGCAATGTATGTGATCAATGCATTTGTTGTGGTGTGGGTTTTGGTGGTTGGGTTTGGATTCGGAGGATGGGCCAGCATGACCAATTTCATCAAGCAAATTGACACGTTTGGGCTTTTCGCAAAGTGCTATCAGTGCAAGCCCCCGGTGGCCGCAGCCGCACCTCCGCCTCATTCTCATCCTCCTAGTCTTCATCATTGA 1458 0.4314 MMRQKQGEEAIVSNMSEVENEEQNNDQEENHSMFSVKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIVLQVFYGIMGSWTAYLISVLYVEYRSRKEKENVNFKNHVIQWFEVLDGLLGKYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALVHGQVENVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTIPSAAAVYWAFGDELLNHSNAFSLLPKNAFRDSAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICMRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKSSARQNAAEKPPFFMPSWTAMYVINAFVVVWVLVVGFGFGGWASMTNFIKQIDTFGLFAKCYQCKPPVAAAAPPPHSHPPSLHH 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02057 485 PANTHER AUXIN INFLUX TRANSPORTER 3 469 - -
Aip04g02057 485 PANTHER OS05G0424000 PROTEIN-RELATED 3 469 - -
Aip04g02057 485 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02057 Aip-Chr4 95679879 95688761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02057 4 465 Organic Solute Cotransporters AT2G21050 78.788 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02057 K13946 - tcc:18597575 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02057 04 95679879 95688761 Aip04g02057 04 95679879 95688761 ECH
Aip04g02057 04 95679879 95688761 Aip02g02234 02 94012815 94021026 PCT