Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02016 ATGAAGACAATTCCATGGCCAACCATAGGGGTGGTGATTTCTTGGTACAGTTCCAACATTGGTGTTCTCCTTCTGAACAAGTACTTGCTAAGCAACTATGGTTTCAAGTACCCTGTTTTCCTCACCATGTGTCACATGATGATGTGTTCTCTTCTCAGCTTCATTGCCATTTCAATAATGCAAGTTGTCCCTTTGCAGAACATACAATCAAAGAGACAGTTTGCCAAGATTTGTTTCCTTAGCCTTGTTTTCTGCTTCTCTGTCGTGTGTGGAAACATATCGCTTAACTACATTCCAGTGTCCTTTAACCAGGCCATCGGCGCCACCACGCCGTTCTTCACCGCCGTTTTTGCCTATTTCATGACCAGCAAAAGAGAGGCTTGGGTTACATATTGTACCCTGTTGCCTGTTGTTGGAGGAGTCATCATAGCTACTGGGGGTGAACGAAGTTTCCATCTGTTTGGGTTTTTGATTTGTGTTTCATCAACTGCTGCCAGAGCATTCAAATCGGTGCTTCAATCTATTTTGTTGTCCTCAGAGGGGGAAAAGTTGAATTCTATGAACCTTCTACTTTACATGGCACCTATAGCAATGTTGGTGTTGCTTCCAGCAACATTACTGATGGAGAAGAATGTGATTGGGACCACAGTGGATCTTGCAAGAAATGATATCAGAATTGTATGGTATCTGCTGTTCAGCTCCTCTCTTGCATATTTTGTTAACTTGACCAATTTTTTGGTCACAAAACATACAAGTGCACTCACCCTTCAGGTTCTAGGAAATGCAAAGGGGGCAGTTGCAGTGGTTGTCTCAATTCTGATATTCAAGAATCCAATTTCAGTTATAGGAATGATGGGCTATGCACTCACAGTCACTGGAGTCATTCTGTACAGTGAAACCAAGAAGAGGTATAGCTGA 918 0.4259 MKTIPWPTIGVVISWYSSNIGVLLLNKYLLSNYGFKYPVFLTMCHMMMCSLLSFIAISIMQVVPLQNIQSKRQFAKICFLSLVFCFSVVCGNISLNYIPVSFNQAIGATTPFFTAVFAYFMTSKREAWVTYCTLLPVVGGVIIATGGERSFHLFGFLICVSSTAARAFKSVLQSILLSSEGEKLNSMNLLLYMAPIAMLVLLPATLLMEKNVIGTTVDLARNDIRIVWYLLFSSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFKNPISVIGMMGYALTVTGVILYSETKKRYS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02016 305 PANTHER SOLUTE CARRIER FAMILY 35 5 304 - -
Aip04g02016 305 PANTHER - 5 304 - -
Aip04g02016 305 Pfam Triose-phosphate Transporter family 11 298 IPR004853 -
Aip04g02016 305 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 148 - -
Aip04g02016 305 SUPERFAMILY Multidrug resistance efflux transporter EmrE 195 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02016 Aip-Chr4 93496791 93501245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02016 8 303 Organic Solute Cotransporters AT3G11320 79.392 6.06e-174 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02016 - - gmx:100799632 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02016 04 93496791 93501245 Aip07g00921 07 11005332 11008249 ECH
Aip04g02016 04 93496791 93501245 Aip10g01684 10 38641336 38652559 ECH
Aip04g02016 04 93496791 93501245 Aip04g02016 04 93496791 93501245 ECH
Aip04g02016 04 93496791 93501245 Aip01g00457 01 5844745 5846987 ECH