Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01414 ATGGACTCCGACGAGGAACACGCGAAAACCCTAACGCCGACGGAGACGAAAGACAAGAAGCACAAGAAGAAGAAGAAGAAGAAGAAAGACGAGCTCGTTAAGGCGAAGATTGAAGTTGTGCGTGAAGAACAGGACAAGATAGGACCAGTCGTTGGGTATTTCCCTTCCGGATTCGATCCAATTAGCGATGGCGCCGCCGCGACGGGGTTTCATGTTTACAGGAACAGGAGGACGAAGAAGAGGATGCAGCTTGTGGTTGGTTCCCCTTCCTCCCCCGTCGAATACGTCGGAACTAGCTATGCCGGTGAGGCCGCCGCCGGGCACTCCTCCATGTATGCCATTGGTGTCTTTGATAAGGAAAAGGGAACGCTCAAGGTTGTTCCCGTTGCTGCCAACAAGATATTTAGATTGGAACCTAAAGTTAAAGCCTTGGATGCCGTTGACAAGGAGCCTGCTACCTCAACAGTGGAAGAGCTGACTCCCTTGGACTGGGCAGCGAAGCAGAGGCAGATTACTAATTTGTTTGGAACAAAGAAGGAAATAACAAGGACTAAAAAGAGGTTAGCTCTCAATCAAGATGATGATCCTGAATCACAAAAGAACCTGGATGTGAAGATGGAAAATGTTGATGTAAACAAATTGGCTCTTGAAGGTACTGAATCTCAAGTTGCCCGCAACATACCACCATGTAATCTTTCTGCAACCTCGCCGCAGGAGGCATATGTATTGGATCAAATCATCCTTAAAGGAGAGTGGGGTTACCTTGAAGACATTTATTATATTTTGTTGAAGGAAGAAGAAGCTGACTTCAGTTCTTACCCAACTTTTGTTTCCAACAGGATTAATAAATTAAAGAATATTAAGGATGATTCAGAAAAGAGGAAACACTCATGCATACTGTCATTCATCAGTCATCTTGTAACGTTCAAAGAACAGAACTCTTTCAGGGATAACTCCACCATGAAGCGTCTGAAGATCCCCCACATTCTGCGTAATAGATTCTCGGCAATGTTTGGCAATACTTCTGGTTCTAATTCAAAATGGCTGTCTTCTGAGAAGATTAGTCTTCTCGTTTGTTATATCCTCGTGCTGACTCTTTTCTTTGACGAATTCGAGACTGACTATTGTGATATAGCAAAGGATCTGAAGATGAGCCAACTGGTGGTGAAACAACACTATGAGCATTTGGGTTGCAAGGTTAAACGTAAGAACAATGTCAACCATGCCACACTTCCCATCCCTCTTAAATTTCCTGGTGTGCGTCAGAGGAAGCGAAAACGTTAG 1284 0.4447 MDSDEEHAKTLTPTETKDKKHKKKKKKKKDELVKAKIEVVREEQDKIGPVVGYFPSGFDPISDGAAATGFHVYRNRRTKKRMQLVVGSPSSPVEYVGTSYAGEAAAGHSSMYAIGVFDKEKGTLKVVPVAANKIFRLEPKVKALDAVDKEPATSTVEELTPLDWAAKQRQITNLFGTKKEITRTKKRLALNQDDDPESQKNLDVKMENVDVNKLALEGTESQVARNIPPCNLSATSPQEAYVLDQIILKGEWGYLEDIYYILLKEEEADFSSYPTFVSNRINKLKNIKDDSEKRKHSCILSFISHLVTFKEQNSFRDNSTMKRLKIPHILRNRFSAMFGNTSGSNSKWLSSEKISLLVCYILVLTLFFDEFETDYCDIAKDLKMSQLVVKQHYEHLGCKVKRKNNVNHATLPIPLKFPGVRQRKRKR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01414 427 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 19 427 IPR009668 GO:0003677|GO:0006351
Aip04g01414 427 Coils Coil 25 45 - -
Aip04g01414 427 MobiDBLite consensus disorder prediction 1 30 - -
Aip04g01414 427 MobiDBLite consensus disorder prediction 1 17 - -
Aip04g01414 427 Pfam A49-like RNA polymerase I associated factor 68 418 IPR009668 GO:0003677|GO:0006351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01414 K03005 - gmx:100812427 488.034