Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01404 ATGGACAAAAACATTGTGCTGACAAAGCCATTCTCGTTGGAGAAAGAATCGGATGGTGATTCTGATTATAGAGCTCCAAATCTTATGAAACGAATACTGAGTCTATTTAAGAATGTGCGGCCAGGATCTGATCTTACTCGCTTTCAGCTGCCAGCAGAGTTCAACATGCCAAAGTCACAACTCCAATGCTATGGTGAAGAGGTATATTGTGGTGGTTGTGACATGCTAAGCAGATGCAACAATGGAGAAAGTCCAGTTGATAGGTTCATATCAGTTGTAGCATGGAGCATTTCTACAAGACGCCCTGTCATTTTTGGAGTTGCTCCTTACAATCCCATTCTTGGAGAGACACACCATGTTTCCACACCAAATCTTAATGTTTCTCACCACCCTCCGGTGACTGCACTTCATGCAACAAATGAGAAGGAAAAGATAGAAACAATATGGTGTAGTTATGTTGTTCCAAAGTTCAATGGTGCCGCAGTGGAAGGTCAAGTGCATGGTAAAAGAGAATTGAAGCTCCACAATCATGGAGAGACATATGAAATGAATGCTCCTTATCTCATGATCAGGTTTCTTCCAGTTCCTAGCTGTGATTGGGTCGGCAATGTCCATATCCGGTGCCCGGAATCTGCCATTGAGGCAGAGTTATGCTACACAAGCCACACTCTGTTCGGATTCCGGGCAAGCCGGAAATCAATAAAGGGGAAGATCATTGATTCAATATCAACGAAGATTCTATATGAAATTAATGGTAATTGGGATAGTATTGTGACAGCGAAGGATACAAATAATGGAGAAGTGAGAGTGATATATGATGCAAAAGAAGTCATTTCGGGGCTCCAAACTCCTGTTGTGAAGGACTCTGAGTGTGTGTGGGGAAGCGAATCAGCAGTTGTATGGAGTGAAGTAAGCGAAGCAATCATGAACAAAGAGTGGGAAAAAGCAACAGAAGCAAAGAAATCTGTGGAGGAAAGGCAAAGGGAGCTTTCAAGAGAAAGGATCACAAAAGGAGAAACTTGGCTTCCTAAGCATTTCACTCTCTCTCACTCCAAAGAAGGAGGCTGGAATTGTTTTCCAATTCAAAACTGGGTCCCACCTTCTCCTATTCAGACCTTGTAA 1122 0.4278 MDKNIVLTKPFSLEKESDGDSDYRAPNLMKRILSLFKNVRPGSDLTRFQLPAEFNMPKSQLQCYGEEVYCGGCDMLSRCNNGESPVDRFISVVAWSISTRRPVIFGVAPYNPILGETHHVSTPNLNVSHHPPVTALHATNEKEKIETIWCSYVVPKFNGAAVEGQVHGKRELKLHNHGETYEMNAPYLMIRFLPVPSCDWVGNVHIRCPESAIEAELCYTSHTLFGFRASRKSIKGKIIDSISTKILYEINGNWDSIVTAKDTNNGEVRVIYDAKEVISGLQTPVVKDSECVWGSESAVVWSEVSEAIMNKEWEKATEAKKSVEERQRELSRERITKGETWLPKHFTLSHSKEGGWNCFPIQNWVPPSPIQTL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01404 373 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 371 IPR000648 GO:0008289
Aip04g01404 373 SUPERFAMILY Oxysterol-binding protein-like 30 358 IPR037239 -
Aip04g01404 373 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 1 371 - -
Aip04g01404 373 Coils Coil 313 333 - -
Aip04g01404 373 Gene3D - 294 363 - -
Aip04g01404 373 Gene3D - 126 284 - -
Aip04g01404 373 Pfam Oxysterol-binding protein 35 352 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01404 Aip-Chr4 27446495 27459313 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01404 K22285 - gmx:100780927 541.576