Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01358 ATGGCCGTTTCAATGAGAGATGTGGATCCAGCTTTCCAGGGGGCTGGACAAAAGGCTGGACTCGAAGTATGGCGTATTGAGAATTTTAATCCAGTTCCTGTCCCCAAGTCCTCTTTTGGGAAGTTTTTCACTGGGGACTCCTATGTGATCTTAAAGACAACTTCGTCAAAAAGTGGTGCTCTCCGGCATGATATCCATTACTGGCTTGGTAAAGACACCAGTCAGACAGTTGAGCTAGATGCAGCTCTTGGAGGACGAGCTGTTCAATATCGTGAAGTACAGGGCCATGAAACTGAAAAGTTCCTGTCTTATTTCAAACCATGTATTATACCGCTAGAAGGTGGAGTTGCTTCTGGTTTCAAACATCCTGAGGCAGAGAAACACAAGACACGATTGTTTTCAAAAATCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGATGGAAAATTGATGGCTGATCCTGAAACTGGAGAATTCTGGGGTTTCTTTGGGGGATTTGCTCCTCTTCCTCGCAAAACTGTTGGCGAAGATGAAAAGCCTGCTGATTCTCGCCCACCAAAGCTGCTTTGTGTTGAAAAAGGACAGGCAGAACTTGTTGAAACTGATTCTTTGAAAAGAGAATTACTGGATACGAATAAATGCTATATTCTGGACTGTGGATTGGAGGTGTTTGTCTGGATGGGAAGAAACACCTCCCTTGATGAAAGGAAAAGTGCAAGTGGAGTAGCAGATGATTTAGTCAGTGGCACTGATAAATTGAAACCTCAAATAATTCGTATAATTGAAGGATTTGAAACAGTAATGTTCAGATCCAAGTTTGATTCTTGGCCTCAGATCACTGATGTAACCGTTTCTGAAGATGGACGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGAGTGAATGTCCAGGGTCTCTTGAAAGCTGATACAGTAAAGGAAGAACCTCAACCTTACATTGATTGCACAGGACATTTGCAGGTTTGGCGTGTGAATGTAGTTGTGGAACTTGGTCTTGAGGATATGGTGGACGTTGTCGGGGTTGGAGCTGATGCTGTTATTGAGAACATGGAGGTGGATGCTTCTAGTGCGACACGCATAGCAGTTACACCATGGCTTGATCTTGGAACTGAAGAGGAGGAAGAAAAAGATGGAGAAGAAAACTATAAAGGTGAAGAAGCAGAGTATGAATGTTAG 1224 0.4297 MAVSMRDVDPAFQGAGQKAGLEVWRIENFNPVPVPKSSFGKFFTGDSYVILKTTSSKSGALRHDIHYWLGKDTSQTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPLEGGVASGFKHPEAEKHKTRLFSKIFQFNGSNSSIQERAKALEVDGKLMADPETGEFWGFFGGFAPLPRKTVGEDEKPADSRPPKLLCVEKGQAELVETDSLKRELLDTNKCYILDCGLEVFVWMGRNTSLDERKSASGVADDLVSGTDKLKPQIIRIIEGFETVMFRSKFDSWPQITDVTVSEDGRGKVAALLKRQGVNVQGLLKADTVKEEPQPYIDCTGHLQVWRVNVVVELGLEDMVDVVGVGADAVIENMEVDASSATRIAVTPWLDLGTEEEEEKDGEENYKGEEAEYEC 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01358 407 SMART VILL_6 19 108 IPR007122 GO:0051015
Aip04g01358 407 SMART VILL_6 195 285 IPR007122 GO:0051015
Aip04g01358 407 Pfam Gelsolin repeat 206 278 IPR007123 -
Aip04g01358 407 Pfam Gelsolin repeat 28 102 IPR007123 -
Aip04g01358 407 CDD gelsolin_S3_like 195 284 - -
Aip04g01358 407 Gene3D Severin 184 296 IPR029006 -
Aip04g01358 407 Gene3D Severin 7 151 IPR029006 -
Aip04g01358 407 MobiDBLite consensus disorder prediction 387 407 - -
Aip04g01358 407 PANTHER VILLIN 1 341 IPR007122 GO:0051015
Aip04g01358 407 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 195 326 IPR036180 -
Aip04g01358 407 PANTHER VILLIN-4 1 341 - -
Aip04g01358 407 CDD gelsolin_S1_like 12 115 - -
Aip04g01358 407 SUPERFAMILY Actin depolymerizing proteins 9 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01358 Aip-Chr4 25126389 25142587 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01358 - - adu:107483828 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01358 04 25126389 25142587 Aip01g03304 01 136147797 136155656 PCT