Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01352 ATGCTTTGTGCAACTCATCATACATTATTATTCTTTAACCCGTGTTGTTTCCTTAAGAATCGAGTTTCAAATGGCAGAGGATTTTCTTCAAGTGAGAGTATTTTTGTCAGAGGTCACCAAATGGACATCAAACAATATTTTGGACTTATATCATCCCGTTCTCCACGAAACAAAGCAGGAAGAGTTGTATCCCCAAGCTGTGTGCTGCCATTGACAGAAGAGAATGTGGAGAAGGTTTTGGATGAGGTTAGACCTGGCTTGATGGCTGATGGAGGGAATGTGGCTTTGCATGAGATAGATGGCCTTGTCGTCGTCCTCAAGCTTCAAGGAGCATGTGGCTCGTGTCCTAGCTCGGCCATGACATTAAAGATGGGAATTGAGACTCGCCTTCGCGATAAGATTCCAGAAATCATGGCAGTGGAGCAGATTGTGGACGCTGAGACTGGCCTCGAGTTAACAGAGCAAAATGTTGAGAGTGTTCTTTCTGAAATTAGGCCATACCTTGTTGGCACTGGGGGAGGAATATTAGAGCTTGTTAAGATCGATGATTATGTTGTCAAAGTTCGGCTAAGTGGACCGGCGGCCGGAGTTATGACGGTTCGCGTGGCGCTAACGCAAAAGTTGAGAGACAAGATACCTTCTATTGGAGCTGTGCAGCTAATAGACTGA 669 0.4529 MLCATHHTLLFFNPCCFLKNRVSNGRGFSSSESIFVRGHQMDIKQYFGLISSRSPRNKAGRVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSAMTLKMGIETRLRDKIPEIMAVEQIVDAETGLELTEQNVESVLSEIRPYLVGTGGGILELVKIDDYVVKVRLSGPAAGVMTVRVALTQKLRDKIPSIGAVQLID 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01352 222 Gene3D - 151 222 IPR034904 -
Aip04g01352 222 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 151 221 IPR034904 -
Aip04g01352 222 Pfam NifU-like domain 76 141 IPR001075 GO:0005506|GO:0016226|GO:0051536
Aip04g01352 222 Pfam NifU-like domain 157 218 IPR001075 GO:0005506|GO:0016226|GO:0051536
Aip04g01352 222 PANTHER NIFU-LIKE PROTEIN 3, CHLOROPLASTIC 11 222 - -
Aip04g01352 222 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 73 147 IPR034904 -
Aip04g01352 222 Gene3D - 68 150 IPR034904 -
Aip04g01352 222 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 11 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01352 Aip-Chr4 24922007 24923755 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01352 - - gmx:100806364 351.288