Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01334 ATGCAATTCTTGTCAGTGGGTTTACCGGCCAATAAGGTTCCGGTTCGGTCACTGAACATGAACCCAACAAGAATGTCAATGAAGGACCCTGGCAACATGGCTGTGGTGGCTGCACCCAAATGGGCCCAGAAAACCATTACTTTGCCTCCTCACAAACGCGGTTGTCATCTCGTTACTCCAAAGATAGTGAAAGAAATTGAACAAGATTTGTCTGGATTCAAGTGTGGCCTAGCTCATGTATTTTTGCATCACACAAGTGCTTCTCTAACCATCAATGAGAATTATGACTATGATGTTCGGGATGATACAGAAACGTTCCTCAATCGGATAGTTCCTGAGGGGCCATCTGCACCTTGGAGGCATACTATAGAGGGCCCAGATGACATGCCTGCACATATCAAATCATCTATGTTTGGTTGTGCACTCATGATACCTATCACGAATGGAAGGCTTAACATGGGAACATGGCAGGGTATATGGCTTTGTGAGCACCGGGATTATCCTACACCCCGCACAGTTGTCGTCACTCTCAATGGAATATGA 543 0.4586 MQFLSVGLPANKVPVRSLNMNPTRMSMKDPGNMAVVAAPKWAQKTITLPPHKRGCHLVTPKIVKEIEQDLSGFKCGLAHVFLHHTSASLTINENYDYDVRDDTETFLNRIVPEGPSAPWRHTIEGPDDMPAHIKSSMFGCALMIPITNGRLNMGTWQGIWLCEHRDYPTPRTVVVTLNGI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01334 180 Gene3D - 33 179 IPR035917 -
Aip04g01334 180 SUPERFAMILY YjbQ-like 40 179 IPR035917 -
Aip04g01334 180 Pfam Uncharacterised protein family UPF0047 58 176 IPR001602 -
Aip04g01334 180 PANTHER UNCHARACTERIZED PROTEIN YJBQ-RELATED 24 180 IPR001602 -
Aip04g01334 180 PANTHER - 24 180 - -
Aip04g01334 180 TIGRFAM TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 49 179 IPR001602 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01334 Aip-Chr4 23898051 23900967 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01334 - - gmx:100500593 306.99