Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01263 ATGGAAGCCGAAGAGGAATGTGAAATTGGTGAACAGAAAACCGTTCGTGTATACGCTGATGGCATTTACGACCTCTTTCATTTCGGCCATGCCCGTTCTCTCGAGCAAGCCAAAAAACTGTTTCCAAACACATATCTGCTTGTTGGATGCTGCAATGATGAGATCACACACAAGTATAAGGGAAAAACTGTCATGACTGACAAGGAACGCTATGAATCTCTTCGCCACTGCAGGTGGGTTGATGAAGTTATACCAGATGCGCCATGGGTAATCACACAGGAATTCATTGACAAGCATCAAATTGACTATGTGGCTCATGATTCTCTTCCTTATGCTGATACAAGTGGAGCTGGAAAGGATGTCTATGAATATGTTAAGTCTATTGGAAAGTTTAAGGAAACAAAGCGGACTGATGGAATTTCTACTTCAGATATCATAATGAGAATAATCAAAGATTATAATCAGTATGTAATGCGTAACTTGGACCGTGGTTATACCAGAAAGGATCTGGGTGTCAGCTATGTCAAGGTTTCTTTGTTTCACACCTTTGTTTTGCAAATTCTCAAGATTTTTGTGTTACCTATCAGTTGCCTCATTAACTTACTTTTGTAG 612 0.3987 MEAEEECEIGEQKTVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITHKYKGKTVMTDKERYESLRHCRWVDEVIPDAPWVITQEFIDKHQIDYVAHDSLPYADTSGAGKDVYEYVKSIGKFKETKRTDGISTSDIIMRIIKDYNQYVMRNLDRGYTRKDLGVSYVKVSLFHTFVLQILKIFVLPISCLINLLL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01263 203 SUPERFAMILY Nucleotidylyl transferase 16 148 - -
Aip04g01263 203 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 16 83 IPR004821 GO:0003824|GO:0009058
Aip04g01263 203 Gene3D HUPs 2 191 IPR014729 -
Aip04g01263 203 CDD CCT 13 164 IPR041723 -
Aip04g01263 203 Pfam Cytidylyltransferase-like 18 147 IPR004821 GO:0003824|GO:0009058
Aip04g01263 203 PANTHER CYTIDYLYLTRANSFERASE 4 177 IPR045049 GO:0004105|GO:0006657
Aip04g01263 203 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 4 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01263 Aip-Chr4 20941726 20947694 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01263 13 179 Acyl Lipid Metabolism Gene Families AT4G15130 82.036 4.29e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01263 K00968 - gmx:100786249 347.051