Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01253 ATGAGTTCTTCCACCACTGCTTCCTTTCATAAATGTTTCAAGCCTAACCACCACCACCATCAACATCACGCGTTCACGTTCGCTTTTCTTCACTCTTGTTTCTTCTTCTTCTTTCTCTTGTCAGCTCCTCCTCCTGCATGCGCTTCAACGTTTTCTGGTAATGAAACTGGAGATTTAGAAAAACAAGGTGATTTGTTTCCACAGATTCTACGAGATGAGGCAGTGGGGAGACTCTATCAGCTTGGAAAGGTGAGTGATGGTAATGGCTATCTGGAGAGAACATTCTTGAGTCCTGCATCTATGAGAGCAATCAACGTTATCCGCGAGTGGATGGAGGACGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTACACGGCCGAGTTGAAGGTGTGAATCCAAATGCCGAGGCCTTATTGATTGGATCTCACATGGATACTGTTGTGGATGCTGGCATGTTTGATGGATCACTAGGAATAGTATCAGCAATATCTGCACTAAAGGCTTTGAAAGTCAATGGAAAGCTGGAAAAGCTAAAGCGCCCTGTTGAGGTGATTGCATTTTGTGATGAAGAAGGAGTGAGGTTTCAAACTACTTTCTTGGGTAGTGGCGCTATAGCCGGCATTTTACCTGCTACAACATTGGAGATATCTGATAAGAGGGATGCTATGATAAAAGATGTTCTCAAGGAGAATTCTATAGAAATTACAGAGGAAAGTTTGTTACAGCTCAAGTATGATCCAAAATCTGTTTGGGGCTATGTTGAGATTCACATTGAGCAGGGCCCTGTGCTAGAACAGAAGGGTTTTCCACTTGGTGTGGTAAAAGGCATAGCTGGCCAGACCAGATTGAAGGTTACTGTTAGAGGATCACAGGGTCATGCCGGGACTGTACCGATGTCCATGCGCCAAGATCCTATGGCTGCTGCTGCTGAATTAATAGTAGTTATGGAAAACCTCTGCAAGAACCCAGAAGAATTCCTTTCTTATGATGGTCATTGCAGTGATTCTACGGTGAAATCACTTTCGAGTTCACTTGTTTGTACAGTTGGAGAGATATCAACATGGCCGAGTGCTAGTAATGTCATTCCAGGCCAGGTTACATATACTGTGGACATTCGAGCAATTGATGACCTTGGACGCGAGGCTGTTATCTATGATTTATCAAAAAGAATGTATCAAATATGCGATAAGCGCTCCCATGATGCAGGTGCTGTGATTTGTGATTCTGAGCTAAGTTCGCAGCTCAAATCCGCAGCATATTCTGCACTAAAGAGGATGGAGGGTGACATTCAGGATGAAGTTCCAACATTGATGAGTGGAGCAGGCCATGATGCAATGGCTATGTCTCATTTAACAAAGGTTGGGATGCTGTTTGTGCGGTGTCGCGGAGGAATAAGTCACTCTCCTCAAGAGCATGTTCTAGATAATGATGTTTGGGCTGCTGGTTTGGCAACCCTCTCATTTCTGGAAAATCTATGA 1485 0.4418 MSSSTTASFHKCFKPNHHHHQHHAFTFAFLHSCFFFFFLLSAPPPACASTFSGNETGDLEKQGDLFPQILRDEAVGRLYQLGKVSDGNGYLERTFLSPASMRAINVIREWMEDAGLRTWVDQMGNVHGRVEGVNPNAEALLIGSHMDTVVDAGMFDGSLGIVSAISALKALKVNGKLEKLKRPVEVIAFCDEEGVRFQTTFLGSGAIAGILPATTLEISDKRDAMIKDVLKENSIEITEESLLQLKYDPKSVWGYVEIHIEQGPVLEQKGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELIVVMENLCKNPEEFLSYDGHCSDSTVKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKRMYQICDKRSHDAGAVICDSELSSQLKSAAYSALKRMEGDIQDEVPTLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPQEHVLDNDVWAAGLATLSFLENL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01253 494 Pfam Peptidase family M20/M25/M40 141 483 IPR002933 GO:0016787
Aip04g01253 494 SUPERFAMILY Zn-dependent exopeptidases 66 494 - -
Aip04g01253 494 Gene3D - 281 413 - -
Aip04g01253 494 CDD M20_bAS 77 492 - -
Aip04g01253 494 Pfam Peptidase dimerisation domain 281 391 IPR011650 -
Aip04g01253 494 Gene3D Zn peptidases 87 484 - -
Aip04g01253 494 PANTHER ALLANTOATE DEIMINASE-RELATED 62 488 IPR010158 GO:0016813
Aip04g01253 494 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 79 326 IPR010158 GO:0016813
Aip04g01253 494 PANTHER ALLANTOATE DEIMINASE-RELATED 62 488 - -
Aip04g01253 494 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 140 149 IPR001261 -
Aip04g01253 494 SUPERFAMILY Bacterial exopeptidase dimerisation domain 281 402 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01253 Aip-Chr4 20727632 20731759 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01253 K02083 - gmx:100819399 811.986