Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01248 ATGGCTTCTACAAGAAGTTATTGGAGATGGAGCAAGCAAGATTTCTTGCCAGAAGAGTCCTTCCAAACCTGGACGAACTACACCTCTGCCCTCTCACAAACATGGTTCAGATTCAAGAACCGCCTAACATCAAGATCAGATGATGAAACCGAAACTACACAACTCAGAAAGCAAAGCGAGAATGAAATGAAGCGTTGCCTCAGTTGGTGGGACCTAATCTGGTTCGGTTTCGGAGCAGTGGTTGGTGCTGGAATCTTCGTTCTAACCGGAGAAGAAGCTCATGATACCGTTGGTCCAGCTATTATCTTATCCTATGCAGTTTCTGGAATCTCAGCAATGCTTTCAGTCTTCTGTTACACCGAATTCGCCGTTGAAGTTCCGGTAGCCGGCGGCTCTTTCGCTTACCTGAGAATTGAGTTGGGAGATTTTGCTGCCTTCATAGCTGCAGGCAACATTCTTCTTGAAAGCATTGTTGGAACTGCAGCGGTTTCCAGATCTTGGACTTCTTACTTCACAAGCCTTTTGAATAAACCAAAAAACTCCCTGCGGATCAAGACCGGTCTCAAAGACGGTTACAACTTGCTTGATCCTATTGCTGTTGTGGTTCTTGCCGCCGCCTCCGCCATCGCCATCAGCAGCACTAGGAAAACCTCCTACATCAATTGGATTGCATCTGCTGTCAACACTTTGGTGATTTTGTTTGTGATCATTGCAGGGCTTGTTCATGCTGACACATCAAATTTGACACCTTTTCTCCCATTTGGTGCTAAAGGAATTTTTCAAGCTGCCGCAATTGTTTATTTTGCATATGGGGGGTTTGATAGCATTGCAACAATGGCTGAAGAAACCAAGAACCCTTCAAGGGACATACCAATAGGGCTTGTTGGATCAATGTCGATGATCACAGTGATATATTGCCTAATGGCACTTACACTCAGCATGATGCAGAATTACAAAGACATAGACACTGATGCAGCATTCTCTGTTGCGTTTCAGAGTGTGGGAATGAAATGGGCTAAGTATGTTGTTGCTTTTGGTGCATTGAAGGGTATGACAACCGTTCTTCTTGTTGGGGCATTGGGACAAGCACGTTACACCACTCACATTGCACGTTCACATATGATCCCTCCATGGTTTGCCCTTGTTCATCCAAAGACAGGAACACCTATAAATGCAACACTGTTGATCACAATCTCAAGTGCTTGCATAGCATTTTTCTCAAGCTTGGATGTGTTGTCAAGCTTGTTATCAATAAGCACACTCTTCATCTTCATGATGATGGCTGTGGCACTTTTGGTTAGGAGGTACTATGTGAGAGGTGTGACACCAAGGGAAAACCTTTTAAAGCTAGGAGCATTCTTGCTACTAATCATTGCTTCATCAATGGGGATTTCAGCTTGTTGGGGCATAAACCCTAATGGATGGATTGGATATACAATAACTGTTCCTATATGGTTCTTGGCCACATTAGGCATGTCACTTGTTTTGAAACAGCAAAGGGATCCTAAGGTTTGGGGAGTTCCACTTGTTCCATGGTTGCCATCAATTTCAATTGCAATTAATATATTCCTAATGGGATCTTTGGATTCATCAGCATTCATAAGATTTGGAATTTGCACTGGGGTAATGTTGATATACTATTTTTTCTTTGGACTACATGCAACTTATGACATGGCTCATCAACAAGAAAAGTTGCAAAACGAGAACAAAATTAAGCAAATGGAGACCATGGAGAATGCAGGGCCTTAA 1749 0.4305 MASTRSYWRWSKQDFLPEESFQTWTNYTSALSQTWFRFKNRLTSRSDDETETTQLRKQSENEMKRCLSWWDLIWFGFGAVVGAGIFVLTGEEAHDTVGPAIILSYAVSGISAMLSVFCYTEFAVEVPVAGGSFAYLRIELGDFAAFIAAGNILLESIVGTAAVSRSWTSYFTSLLNKPKNSLRIKTGLKDGYNLLDPIAVVVLAAASAIAISSTRKTSYINWIASAVNTLVILFVIIAGLVHADTSNLTPFLPFGAKGIFQAAAIVYFAYGGFDSIATMAEETKNPSRDIPIGLVGSMSMITVIYCLMALTLSMMQNYKDIDTDAAFSVAFQSVGMKWAKYVVAFGALKGMTTVLLVGALGQARYTTHIARSHMIPPWFALVHPKTGTPINATLLITISSACIAFFSSLDVLSSLLSISTLFIFMMMAVALLVRRYYVRGVTPRENLLKLGAFLLLIIASSMGISACWGINPNGWIGYTITVPIWFLATLGMSLVLKQQRDPKVWGVPLVPWLPSISIAINIFLMGSLDSSAFIRFGICTGVMLIYYFFFGLHATYDMAHQQEKLQNENKIKQMETMENAGP 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01248 582 Pfam C-terminus of AA_permease 505 554 IPR029485 -
Aip04g01248 582 Gene3D Amino acid/polyamine transporter I 61 492 - -
Aip04g01248 582 Coils Coil 560 580 - -
Aip04g01248 582 PANTHER CATIONIC AMINO ACID TRANSPORTER 5 6 570 - -
Aip04g01248 582 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 6 570 - -
Aip04g01248 582 Pfam Amino acid permease 67 434 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01248 Aip-Chr4 20611779 20614826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01248 5 562 Organic Solute Cotransporters AT2G34960 77.281 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01248 - - gmx:100797541 913.679