Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01231 ATGCCACCGCCGCCACCAGCACCAGATCTTCCTGGGTTTTACTATGACCCTGAGAAGAATAGGTATTTCCCCATCAAAGGTCCCATACCAGGCTCTTCTCGTTCTTCCTTTTCTTCTTCCTCTTCATCTTCAAAGCATGCTACTCACAAAGCATCCCAAACATCTTCAACTCAGGAAAAGAGTAGGAGTTGTTGCAGGAAACTTAGAAGCAGAACCTCCAAGTTGATTCAGGCTAGGGAGATAGATGGTCATCGTGTCATTGCTTCCCACAATTACAAGTGTAACTTCACTGAGGAGTTTAGGAAAATACAAGCATCACAGCCTTCGGTATGGAAGTATAAGGGAACAGATAAGATTGGTATTAGTGCTTTGAAACAGGTGCATGTCCGTGTGCAGACATTTGAGGGTGAATGTGATAGTGATATTATATTGACAGGCAGCACCAATGGCTCATTCAGTCTTTGTGAAGTTGGAAGGGATGGGGGATATTTTGATGGTGAGGTTAAGTGGACGCCCGATTGTGTGAAGAGTTATGCTAAAGGGAAAACTGATGAGAATAATGTGGTGCCTGGTCCAGTTTCAAGACCTACTGGAGGGTCCGTGGTTATGTCATCTGGTATATCTTGCATAAGATCAGGCCCAGAGTGCTCTTCTCATGCTGCAAATGGCGGTCCTATTGTTGGACATGCATTGTTTACAACTTTGGGTTCAGAGACATCTGGTGGGTCAATTTATTCTCTTGGCCTTGTGGAATCATTAGATCTTGGGTCAGGTATACTGAACACATGGAGCAGACTGGATGAAGTTGCTTCTTTCAAGTGTACCATTTGGACAGCAGAATATGATTATAGTAGACATCGGGCTATAATTGGTACCAACATGGGAGCTGCATTGGTGGATTTGGCAACTGGGAGGAGATCATGGTTTTTACGATGTAAAAGTGATATCTTTGCACAGCAGATTGTTAATTCAGTAAGTTTCTGTATTTATTCATCCTTTATCTTGTATTATTATTATTCTCTCCATCTTAATGAAATTCTTTTATTAAAGAGATTTTTTAATAAACGAATCTATATAGACCCTTCTCTTACCATTAGAATGCCTTCATCTATATCCAGTTTGGTATCACTTCAGTATGATGATCAGTACTTCTTGGCAAGCTCCATGGACGGAACGATGAGGCTCTATGATCTTCGCCTGCTTCAGAGAGGTTCTGTTCAATCTTATGAAGGGCATGTGAATTCCCATTCGCGTATACAACTTGGTGTTGACCCAGCTGAGAGATTTGTTATGTCAGGTGGAGAGGATCGCAACCTACGGTCATGGAGTATCAAAACTGGCAAACTTCTTTTTGAGGAGAAATTCTGTGATTCAGTTCTCTCCAGTGTTTGCTATCAATCATGTAAAGGGTTTAAAGATGAGGATGAAAAGAACCAACACAAGCATGAATCTTGTATGGGTGCATGGCTTGGATCACATGATGAAGGACTATTTTATATGCGCTGGTTATGTGTGTGA 1518 0.417 MPPPPPAPDLPGFYYDPEKNRYFPIKGPIPGSSRSSFSSSSSSSKHATHKASQTSSTQEKSRSCCRKLRSRTSKLIQAREIDGHRVIASHNYKCNFTEEFRKIQASQPSVWKYKGTDKIGISALKQVHVRVQTFEGECDSDIILTGSTNGSFSLCEVGRDGGYFDGEVKWTPDCVKSYAKGKTDENNVVPGPVSRPTGGSVVMSSGISCIRSGPECSSHAANGGPIVGHALFTTLGSETSGGSIYSLGLVESLDLGSGILNTWSRLDEVASFKCTIWTAEYDYSRHRAIIGTNMGAALVDLATGRRSWFLRCKSDIFAQQIVNSVSFCIYSSFILYYYYSLHLNEILLLKRFFNKRIYIDPSLTIRMPSSISSLVSLQYDDQYFLASSMDGTMRLYDLRLLQRGSVQSYEGHVNSHSRIQLGVDPAERFVMSGGEDRNLRSWSIKTGKLLFEEKFCDSVLSSVCYQSCKGFKDEDEKNQHKHESCMGAWLGSHDEGLFYMRWLCV 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01231 505 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 15 501 - -
Aip04g01231 505 MobiDBLite consensus disorder prediction 31 61 - -
Aip04g01231 505 ProSiteProfiles Trp-Asp (WD) repeats profile. 409 452 IPR001680 GO:0005515
Aip04g01231 505 Gene3D - 359 470 IPR015943 GO:0005515
Aip04g01231 505 Pfam WD domain, G-beta repeat 406 443 IPR001680 GO:0005515
Aip04g01231 505 PANTHER KATANIN P80 SUBUNIT 15 501 - -
Aip04g01231 505 MobiDBLite consensus disorder prediction 24 65 - -
Aip04g01231 505 SUPERFAMILY WD40 repeat-like 139 465 IPR036322 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01231 382 466 Miscellaneous Gene Families AT5G08390 28.235 1.74e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01231 K11799 - gmx:100798753 601.668