Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01217 ATGGACGTTTCGTATCTTTCAGTTTTAACCTCGCCGCTTATTTTTTCTTTTCAGCTTGATTTCAATTTCATTCTCTTCGTCATCATCGTAAAGCAAAAGATAACCCTTTCGAATCTCATCACGTTGAGTTCCATCATTCTCGCATTGAATTCGAGCAGAGAAAAATCCAAAGGTGTAACGGAGGAGTACTTCGTCAGATTTTTTTGCGCCATTAGCGTAGGGTTATTATTTGCTTTGTACCTCTCCGTTGTGGGGAAGATCTACAAGAAGGTTTATTGCTACGAGATGGTGACGGAGATGCAGCTGGTCATGGAGGTGACAGCGACGGCGCTGGCCACGGTGGGAATGGCATTCGACGGCAGATTCTCGGAGATGAAGAGAGAAGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTTCGTTTCGGACAATCTGCCGTCGAATGCCATTCCCACGGTGGCCAGCGCCGTCGCCGTCATCTGCATGA 564 0.3865 MDVSYLSVLTSPLIFSFQLDFNFILFVIIVKQKITLSNLITLSSIILALNSSREKSKGVTEEYFVRFFCAISVGLLFALYLSVVGKIYKKVYCYEMVTEMQLVMEVTATALATVGMAFDGRFSEMKREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFRTICRRMPFPRWPAPSPSSA 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01217 187 Pfam Purine nucleobase transmembrane transport 4 128 - -
Aip04g01217 187 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 3 130 - -
Aip04g01217 187 PANTHER OS09G0467300 PROTEIN-RELATED 3 130 IPR030182 GO:0015211|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01217 Aip-Chr4 19609191 19609754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01217 4 128 Organic Solute Cotransporters AT1G30840 56.489 2.73e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01217 - - aip:110271453 167.548