Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01187 ATGGCTCCAATACCTATTATTTCTCCCATCAACGTTGGACACATTGATGATGTCATAGAACTTAGTAAGACTAAGCCAGACACTATTCCCCAAAGGTTTGTGAGAGACATTACAGAAAGACCAACAATAGCTACGTTAACTCCTAATAAAGCTCACATCATTACTACTCCAGCAAATAATCATCATCATCACATGCCTATCATTGATTTCTCCAATCTTAGTAAACATAACACACATGAACTCTTCCTTCATGAGCTTCTGAACCTTGCAACTGCTTGTAAGAACTGGGGATTTTTTCAGGTGGTCAATCATGGTGTTGACCTCAATCTGATGGAGAGCATAGAGAAGATGAGCAACGAGTTTTTTATGCTACCTTTGGAAGAGAAACAAAAATACCCAATGCTACCAGGAACAATCCAAGGGTATGGACAGGCTTTTGTTTTTTCAGAGGACCAAAAGTTGGATTGGTGCAATATGTTGGCTCTTGCAATTGAACCTCAACATGCTAGGAATCCAAATCTATGGCCTAAGAAGCCAGAAAAGTTCAGTGAAACATTGGAAGAGTACTCAAGAGAAGTAAGGAAGCTATGTGAAAATCTGGTAAAGTACATAGCAATAGGACTAGGTTTGAAAGAAGAGGCGTTTGATTCAATGTTTGGGGAGGCAGTGCAAGCAATAAGGATAAACTACTACCCAGCATGTTCAAGACCAGAGCTTGTGATGGGTCTGAGCCCCCATTCAGATGGAAGTGCCCTCACTGTGCTTCAGCAAGCAAAGGGAAGCCCTGTGGGACTTCAAATTCTCAAGGATGGTATTTGGATTCCTGTTCACACTCTTCCAAATGCTCTTGTCATCAACATTGGTGATACCATAGAAGTTCTCACAAATGGAAAATACAAGAGTGTGGAGCATAGAGCTGTGGCTAATGAGAATAAAGATAGACTCTCACTTGTGACATTTTATGCTCCTAGCTACGAAGTAGAGCTTGGTCCAATGCCAGAATTTGTTGATGCAAACCACCCATGCAAGTTTAGAAGATACAATCATGGAGAATATAGTAAACATTACATAACACATAGGTTGCAAGGAAAGAAGGCCTTAGACTTTGCAAAGATCCAAACCAGAAATGCATTCTAG 1137 0.4055 MAPIPIISPINVGHIDDVIELSKTKPDTIPQRFVRDITERPTIATLTPNKAHIITTPANNHHHHMPIIDFSNLSKHNTHELFLHELLNLATACKNWGFFQVVNHGVDLNLMESIEKMSNEFFMLPLEEKQKYPMLPGTIQGYGQAFVFSEDQKLDWCNMLALAIEPQHARNPNLWPKKPEKFSETLEEYSREVRKLCENLVKYIAIGLGLKEEAFDSMFGEAVQAIRINYYPACSRPELVMGLSPHSDGSALTVLQQAKGSPVGLQILKDGIWIPVHTLPNALVINIGDTIEVLTNGKYKSVEHRAVANENKDRLSLVTFYAPSYEVELGPMPEFVDANHPCKFRRYNHGEYSKHYITHRLQGKKALDFAKIQTRNAF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01187 378 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 221 323 IPR005123 -
Aip04g01187 378 Pfam non-haem dioxygenase in morphine synthesis N-terminal 66 177 IPR026992 -
Aip04g01187 378 Pfam 2OG-Fe(II) oxygenase superfamily 224 323 IPR044861 -
Aip04g01187 378 PANTHER PROTEIN SRG1 11 375 - -
Aip04g01187 378 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 11 375 - -
Aip04g01187 378 Gene3D - 13 363 IPR027443 -
Aip04g01187 378 SUPERFAMILY Clavaminate synthase-like 17 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01187 Aip-Chr4 19094146 19097569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01187 65 372 Glycosyltransferase AT5G59530 35.238 1.48e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01187 - - aip:107639069 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01187 04 19094146 19097569 Aip04g01187 04 19094146 19097569 ECH