Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01161 ATGGAATACAGAACCCTAGACCTCATGATCGTTTCCGCCAAGGATCTCAAGAATGTCAATTTGATATCCAAGATGGACGTATACGCCGTCGTTTCACTCAACGGCGACATCTACAACCCCCAGAAGTTTAAAACCAGCGTCGATCGCGACGGAGGAACCAGCCCTACGTGGAATTTTCCGATGAAGTTCAATTTCAGCGACTCCTTGGCGCAGCAGAATCGTCTCTCTCTTGAGATCAAGATCGTCTCCGACCGTACACTTGGCGACACCCTCATCGGCACCGTCCACGTCCCCCTCCGGGAGCTTCTCGACAATCCCGGCGGAAAAGACGGCAAAGAATTCCGTCAGGTATCTTACCAGGTCAGGAAGCCCTCCGGGAAGCCCAAGGGCTCTCTGAATTTCTCGTACAAAGTTGGCGGCAAGAGTTCAGCTGCTCCGGCTATGGATAAGGCGTCGTCGACGGGGGCGACGGTTAGTTACGCTCCACCGCCGCCGAAGACGGCGGAGTATCCTCCACCGGCGACGGCGTACCCTCCGCCATCCAAGGATTCAAAGAATGAGCCAGTTATGGCTTATCCTGCTCATGCTGCTGGGGCGGCAGGATCAAGTTCCGCGCCATATGCTTACCCGCCGCCACATCAGCAATATCCTGCTGGACACGGATATCCACCCGCTGGATACCCACCCCAGCAAGGCTATGGCGGCTATGGGTACCCGCCTCAGCAACCCGGATATGGGTATCCTCCACAAGGGTACGGGTATCCGGGTCAAGCTGGGTATGGATACTCGCAGCCTCCTCAAAAACCGAAGAAGAACAAGAACAACTTTGGGATGGGATTGGGAGCCGGGTTGCTTGGCGGCGCACTTGGTGGGCTTTTGATTGGTGACATGGTGTCTGACGCGGCTGATTATGATGCTGGCTACGATGCTGGATTTGATGATGCTGGTGGATTCGATTTTTAA 963 0.5504 MEYRTLDLMIVSAKDLKNVNLISKMDVYAVVSLNGDIYNPQKFKTSVDRDGGTSPTWNFPMKFNFSDSLAQQNRLSLEIKIVSDRTLGDTLIGTVHVPLRELLDNPGGKDGKEFRQVSYQVRKPSGKPKGSLNFSYKVGGKSSAAPAMDKASSTGATVSYAPPPPKTAEYPPPATAYPPPSKDSKNEPVMAYPAHAAGAAGSSSAPYAYPPPHQQYPAGHGYPPAGYPPQQGYGGYGYPPQQPGYGYPPQGYGYPGQAGYGYSQPPQKPKKNKNNFGMGLGAGLLGGALGGLLIGDMVSDAADYDAGYDAGFDDAGGFDF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01161 320 Pfam C2 domain 5 105 IPR000008 -
Aip04g01161 320 MobiDBLite consensus disorder prediction 210 224 - -
Aip04g01161 320 MobiDBLite consensus disorder prediction 143 188 - -
Aip04g01161 320 PANTHER OS01G0934100 PROTEIN 1 312 - -
Aip04g01161 320 PANTHER INGRESSION PROTEIN FIC1 1 312 - -
Aip04g01161 320 CDD C2_SRC2_like 5 134 IPR044750 GO:0006952
Aip04g01161 320 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Aip04g01161 320 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 139 IPR035892 -
Aip04g01161 320 MobiDBLite consensus disorder prediction 201 250 - -
Aip04g01161 320 MobiDBLite consensus disorder prediction 256 275 - -
Aip04g01161 320 MobiDBLite consensus disorder prediction 164 179 - -
Aip04g01161 320 SMART C2_3c 5 111 IPR000008 -
Aip04g01161 320 Gene3D C2 domain 2 158 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01161 Aip-Chr4 18206648 18208041 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01161 - - gmx:100217337 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01161 04 18206648 18208041 Aip04g01161 04 18206648 18208041 ECH