Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01152 ATGCTAACTCGCTGCCTCGGCGCCCGGCGGCTCCGTCAGATCCGCCGCGCCTTCCGCCACGGCGCCGTCACGTTCCTCTGCTTATTCCTCACCGTCATCGTCCTCCGCGGCACCATTGGCGCCGGCAAGTTTGGAACCCCTCAACAAGACTTCGACAATCTCCGTCACCACCTCAACTCTCACCGCCGCGTCCTCGAAGAACAACACTCAGAAAAAACCACCACCACCACCAACAACTACGCCACCTTCGATATCTCCACGATCCTCGTCGACGAGCCATCCAGCAAGGACGAAATAACCCGCGATCCAAAGGCGCCATACACATTAGGTCCCAGAATCACCAATTGGGACCAACAACGCAAAAGGTGGCTCCAACAGAACCCTAATTTCCCAAATTTTATCGCTCCGAACAAACCTCGCGTCCTTCTCGTAACAGGTTCGTCTCCAAAACCGTGCGAGAATCCCGTCGGTGACCACTACCTTCTGAAATCCATTAAGAACAAAATCGATTATTGCAGGCTCCACGGGATCGAAATCTTCTACAACATGGCGCTATTTGATGCAGAAATGGCAGGGTTTTGGGCCAAGCTTCCGTTGATTCGGAAGCTGCTCTTGTCGCACCCTGAGGTCGAGTTTCTATGGTGGATGGATAGTGACGCCATGTTCACGGATATGGCGTTCGAGGTTCCGTGGGAGAGGTACAAAGATCACAACTTTGTGATGCATGGTTGGAATGAGATGGTGTATGATGAGAAAAATTGGATTGGGTTGAACACTGGTAGTTTCCTTCTAAGGAATTGTCAATGGTCATTGGATATTCTTGATTCTTGGGCTCCAATGGGACCAAAGGGGAAAGTTAGGGATGAAGCTGGGAAATTGCTCACTAGGGAGCTCAAGAACAGGCCGGTTTTTGAAGCAGACGATCAATCCGCAATGGTGTATCTACTTGCAACTGAGAGGGATAAATGGGGTGACAAAGTGTACCTTGAGAATGGTTACTACTTGCATGGCTATTGGGGAATTCTTGTGGATCGTTATGAAGAGATGATTGAGAATTATCACCCTGGTCTTGGTGATCATAGGTGGCCACTTGTGACACATTTTGTTGGGTGCAAGCCTTGTGGTAAGTTTGGGGATTACCCTGTTGAGAGGTGTTTGAGGCAGATGGACCGTGCATACAATTTTGGTGATAATCAGATTCTGCAGATGTATGGTTTCACTCATAAGTCTCTTGCAAGTAAGAGGGTGAAGAGAGTGAGGAATGAGAGTAGTAATCCACTTGATGTTAAAGATGAGCTTGGTTTGCTTCATCCTGCTTTCAAGGCTATCAGGCTATCAGGAATGTTAATCCAGTGA 1356 0.4875 MLTRCLGARRLRQIRRAFRHGAVTFLCLFLTVIVLRGTIGAGKFGTPQQDFDNLRHHLNSHRRVLEEQHSEKTTTTTNNYATFDISTILVDEPSSKDEITRDPKAPYTLGPRITNWDQQRKRWLQQNPNFPNFIAPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRLHGIEIFYNMALFDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNFVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDILDSWAPMGPKGKVRDEAGKLLTRELKNRPVFEADDQSAMVYLLATERDKWGDKVYLENGYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLRQMDRAYNFGDNQILQMYGFTHKSLASKRVKRVRNESSNPLDVKDELGLLHPAFKAIRLSGMLIQ 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01152 451 Pfam galactosyl transferase GMA12/MNN10 family 138 377 IPR008630 GO:0016021|GO:0016757
Aip04g01152 451 PANTHER - 4 446 - -
Aip04g01152 451 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 137 292 IPR029044 -
Aip04g01152 451 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 446 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01152 Aip-Chr4 17685301 17687418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01152 1 446 Glycosyltransferase AT3G62720 75.983 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01152 K08238 - gmx:100813899 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01152 04 17685301 17687418 Aip04g01152 04 17685301 17687418 ECH