Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01135 ATGCATGATTGTGTGAAAGTCAACGGAAACCAAGTTTATTGGCATATTGCAAATCATCCAGTACCTTTCTATGTGGGTCTAGCAATCCTCTACTTTGCATACAGAAGAAAAGCACCAATTTACTTGATAGACTTTACCTGCTACCGTCCACCTAGTTCTCATAGGCTACCTATTGCCATGTTTGAAGAGAATAGTGTTTTAGATGATTTAGATCCAGAGTCTGTTGCTTTCCAGTGCAAGATCATAGCGAAATCTGGATTCAGTGAGGAAACAGCCATTACTCCATCTTTAGCACAGATACCAAAAGTAAAATCTCTTGCCTTAGCCCTTGATGAGGTCGAAACCATAATGTGTTCAGCAATCTCAGACCTGTTTTGGAGAAACAACATCAACCCGAAATCCATCGACATACTAATCACCAACAGTTGTGTGTTCTGTCCTACACCATCTCTTAGTGCCATGGTGGTTAACAAGTTCAAGATGAGGAGCAACATCATGAGCTTCAACCTATCAGGTATGGGGTGTAGCGCCGGAATCATATCGGTCAGTCTGGCTAAGGACTTGTTGAGGGTTCATAGGGGCTCATTAGCTCTAATTGTGAGCTCAGAGACCCTTAATCTGAATTGGTACACAGGTAAAGTACACTCCATGTTGCTGACTAATTGTCTCTTCAGAATGGGTGGTGCTGCTATATTGATGTCTAGCAAGGTTAATGATAAACATAAAGCAAAGTATGAACTACAACATATTGTTAGAACGATCAATGCTAAAGATGATCAAGCTCATAGATGTGTCTACCAGGATGTGGATCCAGAAAACAAAGAAGGTATTGCGATATCAAAGGATGTTGTCCATGTGGCCGGAGATACATTGAAGAAGAACATAGCTTCACTAGGGCCATTAGTTTTGCCATTGAGAGAGCAATTCCTATATGTAATTTCTATTATATGCTGCAAGGTGTTGTATGGAAGAAGATCAGGCATCTATACTCCAAATTTCAATCTCGCCTTCGAGCATTTCTGCATACACTCCGGGGGAAGATCTGTCATAAATGCCATTGAGAGAAGCTTGAGGTTAAGGAAACAGGACGTGGAAGCATCCAACATGACCCTTTACAGGTTTGGAAACACGTCGTCTTCTTCGATTTGGTATGAGCTTAGCTACACAGAAGCGAAAGGGAGGATGAAACGTGGCGATAGGGTGTGGCAAATCGCCATTGGAAGCGGATTCAAGTGTAGCAGCGCGGTGTGGAAATGTTTACAGGACGTGACCCCGGACAATGGCAGTGCTTGGAGGGATACAATTAACATGTACCCTGTACAAGTAACTGATATGAAAATAAGCTGA 1347 0.4232 MHDCVKVNGNQVYWHIANHPVPFYVGLAILYFAYRRKAPIYLIDFTCYRPPSSHRLPIAMFEENSVLDDLDPESVAFQCKIIAKSGFSEETAITPSLAQIPKVKSLALALDEVETIMCSAISDLFWRNNINPKSIDILITNSCVFCPTPSLSAMVVNKFKMRSNIMSFNLSGMGCSAGIISVSLAKDLLRVHRGSLALIVSSETLNLNWYTGKVHSMLLTNCLFRMGGAAILMSSKVNDKHKAKYELQHIVRTINAKDDQAHRCVYQDVDPENKEGIAISKDVVHVAGDTLKKNIASLGPLVLPLREQFLYVISIICCKVLYGRRSGIYTPNFNLAFEHFCIHSGGRSVINAIERSLRLRKQDVEASNMTLYRFGNTSSSSIWYELSYTEAKGRMKRGDRVWQIAIGSGFKCSSAVWKCLQDVTPDNGSAWRDTINMYPVQVTDMKIS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01135 448 SUPERFAMILY Thiolase-like 29 236 IPR016039 GO:0016746
Aip04g01135 448 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 21 444 - -
Aip04g01135 448 Gene3D - 61 418 IPR016039 GO:0016746
Aip04g01135 448 PANTHER 3-KETOACYL-COA SYNTHASE 21 444 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aip04g01135 448 SUPERFAMILY Thiolase-like 248 419 IPR016039 GO:0016746
Aip04g01135 448 PIRSF Very_long_ch_3-ktacl-CoA_syn 10 448 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aip04g01135 448 CDD CHS_like 25 417 - -
Aip04g01135 448 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 338 418 IPR013747 -
Aip04g01135 448 Pfam FAE1/Type III polyketide synthase-like protein 34 319 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01135 Aip-Chr4 17359309 17361360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01135 11 443 Miscellaneous Gene Families AT1G19440 51.253 6.30e-166 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01135 K15397 - gmx:100783404 684.485