Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01129 ATGGGTCACACAACCTTGGAAGTTGGAGCTGATGGGGTTGGCATCATCACCATCATCAATCCCCCTGTTAATTCTCTCTCCTTTGATGTGTTGAGCAGTTTAAAGGAGAATTTTGATCAGGCTTTACACAGAGATGATGTCAAGGCAATTGTTGTTACAGGTGCAAAGGGCAAATTTTCTGGTGGTTTTGATATTGCTGGTTTTAGTAGAATTCAAGCGGGAAAAGAGATTTCAAACCCGAGTTTGCCATCAGTTGAAATCATCACTGACACTGTGGAAGCGGCAAAGAAACCTACAGTTGCTGCCATTGATGGTCTTGCCCTGGGTGGGGGGTTAGAGCTTGCAATGGCATGCACGACTCGGTTATCAACCCCAACTGCTCAACTAGGTTTGCCCGAACTTCAGCTGGGGTTAATTCCCGGGTTTGGAGGGACGCAACGACTACCTCGTCTTGTTGGCCTGGCAAAGGCCCTTGAGATGATGCTGACCTCAAAGGCAGTTAAGGGGGAGGAAGCTTGTAGTTTGGGGCTTGTAGATGCTGTAGCACGAAAGCGGGCACCTAATCTGACTCACCCTTTGGTTTGCATTGATGCGATTGAGACAGGAATAGTTTCTGGTCCTCGTGCAGGACTCTATAAGGAAGCTGAAGTCTTTGAAGGGCTGGTTACTTCAGATACTTGCAAGAGCTTGGTTCACGTATTTTTCTCTCAACGAGGAACATCTAAGGTACCCGGGGTTACCGATCGCGGGTTAAAACCAAGAGCAGTGAAAAGGGTTGCAATTCTTGGTGGAGGACTGATGGGCTCCGGAATAGCAACAGCCTTAATTCTTAGTGGCTATCCTGTTCTCTTGAAAGAAGTAAATCAGAAGTTCTTGGATGCTGGTCTTAATAGGGTTAAAGCAAATTTACAAAGCCGTGTCAAGAAAGGGAAAACGACTCAGGCAAAATTTGAAAAAACCTTGTCTCTTCTCAAAGGTACCCTTGACTATGAAAACTTCAAAGATGTGGATCTGGTGATTGAGGCTGTTATTGAGAAGGTTGACTTAAAGCAACAGATCTTTGCTGACCTTGAAAAGTTTTGTCCACCTCATTGCATTCTTGCAAGCAACACTTCCACAATTGACTTAAACCTGATCGGAAACAGGACCAAGTCCCAAGACCGGATTGTTGGGGCCCATTTCTTCAGCCCAGCACATATTATGCCTCTCCTGGAAATTGTACGTACCGAGCATACATCTGCCCAAATAATAGTTGATTTGCTAGATGTTGGAAGGAAGATAAAAAAAACTCCAGTGGTGGTCGGAAACTGTACTGGATTTGCTGTTAATAGGATATTGGTTGACCTCGTTGGTTTTGGAGTGGGGGTTGCAACTGCCATGCAATTTATTGAAAATTTTCCTGAGAGAACTTATAAATCGATGCTTCTTCCACTTATGATAGAGGATAAGCGAGCAGGTGAAACTACTCGCAAAGGATTTTATTTGTATGATGATAGGCGCAAGGCTAGACCTGATCCGGAATTGAAAAATTATGTTGAGAAGTCTAGGAGCATTACTGGTGTCACTGTTGATCCTAAGCTCGCAAAATTACCTGAAAAAGACATCATAGAGATGATCTTCTTTCCTGTGGTGAATGAGGCTTGCCGGGTCCTTGACGAAGGTATCGCAGTCAAAGCATCAGATCTTGATATTTCGTCTGTCATGGGCATGGGTTTTCCACCTTACAGGGGTGGTATCATGTTTTGGGCTGACTCTCTTGGATCCAAATATATTTATACAAGATTGGAGGAGTGGTCAAAATTGTATGGAGAATTCTTCAAGCCTTGTCCCTACTTGGCTGCAAGAGCTGCCAAGGGGATCCCTCTGAGTGACTCAGTGGAGCAAGGAAAGTCACGCTCTTGCTCACCAGTCACCACTCACTACGCCGAAGAAATTAACATGGCGGAACTCAATTTCTTTGTTGGGGTCATAGGGAACATCATCTCAATCCTCATGTTTCTTTCTCCTATGGATACATTTGTGAGAATAATAAAGAAGAAATCAACAGAAGATTTCTCAAGCATACCTTATATTTGCACATTGCTTAACTCCTCTCTATGGACTTACTATGGAATCATAAAGGAAGGAGAGTACCTTGTGGCCACTGTTAATGGCTTCGGCATCTTCCTCCAGATTATCTACATTCTTCTATTCCTTCTCTATGCACCAAAAACAATCAAGATAAAGAGTGCGATTGTGGCTGGGATATTGGATGTTGGGGTGTTGGGAGCAGCAATATTAACAAGCGAAATAGCATTGAAGGGAGAGGCTCGTACTAATGCAGTTGGTGTTATGGGTGCAGGCCTTAACATTCTTATGTATGCTTCACCTCTTGCTGCCATGAAAACAGTAGTGGCGACAAAGAGTGTAGAATATATGCCATTCTTTCTTTCGTTTTTCTTCTTTCTAAACGGTGGCGTTTGGTTGTTTTACGCTTTTCTTGTTCGCGATGTTATTCTTGGGGTGCCAAATGGAACTGGATTTGTACTGGGAGCGATGCAGTTGATACTATATTGTATCTATAGAAATGGAAAATCATCCTCTAAGCACACTTCAAAGCAGGGATTGGAAGAAGGATCTCAATACAATGAGCATCTCATTTCTCATCCCCAACTTAGCTAA 2661 0.4348 MGHTTLEVGADGVGIITIINPPVNSLSFDVLSSLKENFDQALHRDDVKAIVVTGAKGKFSGGFDIAGFSRIQAGKEISNPSLPSVEIITDTVEAAKKPTVAAIDGLALGGGLELAMACTTRLSTPTAQLGLPELQLGLIPGFGGTQRLPRLVGLAKALEMMLTSKAVKGEEACSLGLVDAVARKRAPNLTHPLVCIDAIETGIVSGPRAGLYKEAEVFEGLVTSDTCKSLVHVFFSQRGTSKVPGVTDRGLKPRAVKRVAILGGGLMGSGIATALILSGYPVLLKEVNQKFLDAGLNRVKANLQSRVKKGKTTQAKFEKTLSLLKGTLDYENFKDVDLVIEAVIEKVDLKQQIFADLEKFCPPHCILASNTSTIDLNLIGNRTKSQDRIVGAHFFSPAHIMPLLEIVRTEHTSAQIIVDLLDVGRKIKKTPVVVGNCTGFAVNRILVDLVGFGVGVATAMQFIENFPERTYKSMLLPLMIEDKRAGETTRKGFYLYDDRRKARPDPELKNYVEKSRSITGVTVDPKLAKLPEKDIIEMIFFPVVNEACRVLDEGIAVKASDLDISSVMGMGFPPYRGGIMFWADSLGSKYIYTRLEEWSKLYGEFFKPCPYLAARAAKGIPLSDSVEQGKSRSCSPVTTHYAEEINMAELNFFVGVIGNIISILMFLSPMDTFVRIIKKKSTEDFSSIPYICTLLNSSLWTYYGIIKEGEYLVATVNGFGIFLQIIYILLFLLYAPKTIKIKSAIVAGILDVGVLGAAILTSEIALKGEARTNAVGVMGAGLNILMYASPLAAMKTVVATKSVEYMPFFLSFFFFLNGGVWLFYAFLVRDVILGVPNGTGFVLGAMQLILYCIYRNGKSSSKHTSKQGLEEGSQYNEHLISHPQLS 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01129 886 Pfam Sugar efflux transporter for intercellular exchange 774 858 IPR004316 GO:0016021
Aip04g01129 886 Pfam Sugar efflux transporter for intercellular exchange 653 737 IPR004316 GO:0016021
Aip04g01129 886 PANTHER GLYOXYSOMAL FATTY ACID BETA-OXIDATION MFP-A PROTEIN 180 446 - -
Aip04g01129 886 PANTHER GLYOXYSOMAL FATTY ACID BETA-OXIDATION MFP-A PROTEIN 2 181 - -
Aip04g01129 886 Gene3D - 771 859 - -
Aip04g01129 886 Gene3D - 652 738 - -
Aip04g01129 886 PANTHER 3-HYDROXYACYL-COA DEHYROGENASE 180 446 - -
Aip04g01129 886 PANTHER 3-HYDROXYACYL-COA DEHYROGENASE 2 181 - -
Aip04g01129 886 PANTHER 3-HYDROXYACYL-COA DEHYROGENASE 446 628 - -
Aip04g01129 886 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 446 513 IPR008927 -
Aip04g01129 886 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 256 437 IPR036291 -
Aip04g01129 886 PANTHER GLYOXYSOMAL FATTY ACID BETA-OXIDATION MFP-A PROTEIN 446 628 - -
Aip04g01129 886 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 532 619 IPR008927 -
Aip04g01129 886 Gene3D - 251 434 - -
Aip04g01129 886 Pfam Enoyl-CoA hydratase/isomerase 11 182 IPR001753 GO:0003824
Aip04g01129 886 SUPERFAMILY ClpP/crotonase 2 245 IPR029045 -
Aip04g01129 886 Pfam 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 259 436 IPR006176 GO:0006631|GO:0070403
Aip04g01129 886 Gene3D - 1 250 - -
Aip04g01129 886 Gene3D - 441 618 - -
Aip04g01129 886 CDD crotonase-like 11 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01129 Aip-Chr4 17215112 17226794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01129 2 632 Acyl Lipid Metabolism Gene Families AT3G06860 68.428 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01129 K10527 - gmx:100777319 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01129 04 17215112 17226794 Aip04g01129 04 17215112 17226794 ECH