Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01122 ATGGAAATTCTCAAACTCATTACCATTACTTCACTCTCTTTTGCTTTCTTCTTCTTCTACTTATTCTCTTGTTTTAAATTTACATCTTCAGATAGAGCAGAATTACCCATTTTTGTGTTCAGTTGGTGGGATGATAAGAATACATTCCATGCCGGTGAGACTGCAGCCATGAAGGTGAAAGTTCTTGAGCGTGCTGATATGATTGACAAGAAAGGTTTCAAACCTATTGTTGGAGTGTTCAATGTACTTATCAAAGATGACCATTATCAAGTCTATGACTCATCCTTGCATTTTCAAGTTGAGCCAGGGAATATGTACCCTTCTGTGTGTGTTGCATCATGGAATGGCATGAAACATGAGTACGAAGCTGGTGCAAAAGCTACCATCACGGTACTCCTCAAAGATGCATTTGGGAACAGTATCTCTAATAAAAAAACAACTCAAGTGTCTTATTTGCCTGACTTTAAGTTGTTTGCGCTATATGAAAATAATGGTTCTATTGCTAGTATGCCAGACATATCCAATATTGGATGGAACGAGTTTGATTATGTTATCATTGAGTTTGTTGTTATTAAAGCTGGAAAATTCTCATTGTACATAGAAGGAGGGAATCAAACCTTGAATGGCTCTCCATTACCATTGAAAGTGAATTCAGGTAGACCTGTAGATGTTTCTAAATGTGTTGCCAAATGGAACATTGATTCACATGCATGGCAATTGTCTTCTAAGATGGAAATCTTCATTCATCAATTAGATCAGTATGGGAATCTAGTTTCAGGGTTGTATCCTTTCGATGCCGAAGTCGTCCAAAGAGATACAAACTTGTCAATACCAATATCAGATCAACATTTTGAAGAAGTGGAAGCTGGAATTCAATTATTTTCATTTGGAAATTGGGAACCAGGAAAGTTCCTCTTAACATTATATGATGCCAAGCATAACAAAAGCATTTCCAATATGCCATATGCTTATTCTGTTTTTGTAGGTTATTGTGATGGAATAAAAAGTATTGTTAATGGATCTGGTTTGAATGATTCAGTAGCTGGCATAAAGCAAGAATTCTCTGTTTATTTAAATGATGTTTATGAATATCCTTCTCCTGTCGAAGTAGACATAGTTGAAGTACAAATTCTAAAAGAAAATGACTCGTATAGTGTTTCTCCATTCATTTATCCCATCCTAACTAAAAATGTTTCAAGAGTGCAACAATATGGTTTTATCAGTCAGATGAATGTTGCCCCTTCCCCTTCAATGGACCTTAATAACAATATTAACAGCAGTGAAAGCTCTATAGCTATGAGTGCTTTCCATGTAGATTACACACCTGAGAAAAGTGGGTTTTATGATATACATGTATATTGTGGAAATGTCTTATTGAACAAGGGTCATACACTCAGAAAAGAAGTAAAAGCAGGTGAAGTTAATGGTTCCTTGTCAAATGTGGTCAAGTTTTCTTCTAAGGTGGCAAAGATGTCAGAAAATGAAATACTAGTGCAGCTTATGGATTCATTTTCAAACCCTGTTCTTGCACAACAATCAAGGTTGAAGTTGGAGACTACTTCAGCTAACAAATCTCTTTTTCAAACTTTGGACATTAAGGATAACATGGATGGTTCATACAATTGTAGCTATATGGCTAAAGATGTTGGAACTTATGAGATTTGTGCTTCCTTTGATGGCAAGGATATTCTGCCATGTCCCTTCAGTATCAATGTGTATAGCAGTGAGTATTTTCCCAAAGCCAACAATGATATAGTATCTGTTTGGGAGGATCAATCAATTGCCATTGATGCTTTAGCAAATGATTACTTTGCTGGTGATAATGCAACTATAGTTCAATTCTCAAAACCAGACCATGGTTCACTTCTACAGAATGGAAGGATGTTTCGTTATACTCCATATAAATATTATTATGGAAATGATTCATTTTGGTACACAATATCTGATGTGAATGAAAACCTTGCTAATGCTTATGTAAACATATCTGTTCTCAATGTTCCACCACAATTTGCTTCTGTTCCAAGTGAACTACAAGCAACAGAAGATTTGATATGTCCTAGGTTTGGTGGCTTCTCTGGGTTTGAGATAGCATATTCAAATCCAATAGAGAATATTTCAGTTAATTTGAGTGCACAATTTGGAAGTATACTTTTGTTTCCTATGGTGATGCAATTTGGACAAGCAATGTGGAATGAACTTACCATAAATTCAGGGAATGAAACTGCAAGCAGTTTGCAACTACAAGGCACTGTGGAAGTAATTAATTATGCTCTTCACTCAATTCAGTATCTGGGAAATGAGAACTTTTATGGTGGAGATATTATTCAGGTTTCTGCTAAGAATAAGAATGGAATGAATTCATTGGGTGTTCCCATTTTCATTGACCCTGTCAATGATCCTCCATATATTAGAGTTCCCAACTTCATTGTATTGAAGAGTAATGAAGATGAGACCCTTATTTTTGACAAAGAGAAAGATAAGTTCAACTTTTCCATTGGAGATCCTGATCTTCCTAATTTCCCTGGAGGTCAAAGTAATTTTATGTTGACTTTCTCTATGGAAGTAAATGATGGTTTATTAGTAACAAATCTTCCATCTAACTTGATCAACACAACTGAAGTGAAGCACAAGGATAGTTATCAATGGCAGCCTCTTCAGACATATGTTACAATCTCAAAGCATTTTATGGTCAAAGCTACTGGAATCAGATTTCAGGGCACAGTCAACGACTGCAATGGTGTTATGGAGCAACTGTTTTTTCATGGTGGCGAGCATGGAGGTGTTTTGACATTGACATTGAATGACATGGGAAACCATGGATGTTATCCTAATTGTGCAGAGGGAATGTCAATGCCTTTATATACTGAGGCTACGGTTATTTTAATGAGAAAGCAACTAATGAGTTCATTTGTTGCTCACAGCTTAGGATCAATCATTGTCATTGAATTTGTTGTCATGTTCTCACTGGGAGTGCTGCTTTTATACTTCACATGCAAATGTGCAATTCTCCTTTTACATGAAAGAAGAAATCGTCACAAAAGCATGGTGGCAAGTCAACAATTGAAATCCAGCATGCCTCAAACTCAACATTTAAGCATTTTGTAG 3105 0.3601 MEILKLITITSLSFAFFFFYLFSCFKFTSSDRAELPIFVFSWWDDKNTFHAGETAAMKVKVLERADMIDKKGFKPIVGVFNVLIKDDHYQVYDSSLHFQVEPGNMYPSVCVASWNGMKHEYEAGAKATITVLLKDAFGNSISNKKTTQVSYLPDFKLFALYENNGSIASMPDISNIGWNEFDYVIIEFVVIKAGKFSLYIEGGNQTLNGSPLPLKVNSGRPVDVSKCVAKWNIDSHAWQLSSKMEIFIHQLDQYGNLVSGLYPFDAEVVQRDTNLSIPISDQHFEEVEAGIQLFSFGNWEPGKFLLTLYDAKHNKSISNMPYAYSVFVGYCDGIKSIVNGSGLNDSVAGIKQEFSVYLNDVYEYPSPVEVDIVEVQILKENDSYSVSPFIYPILTKNVSRVQQYGFISQMNVAPSPSMDLNNNINSSESSIAMSAFHVDYTPEKSGFYDIHVYCGNVLLNKGHTLRKEVKAGEVNGSLSNVVKFSSKVAKMSENEILVQLMDSFSNPVLAQQSRLKLETTSANKSLFQTLDIKDNMDGSYNCSYMAKDVGTYEICASFDGKDILPCPFSINVYSSEYFPKANNDIVSVWEDQSIAIDALANDYFAGDNATIVQFSKPDHGSLLQNGRMFRYTPYKYYYGNDSFWYTISDVNENLANAYVNISVLNVPPQFASVPSELQATEDLICPRFGGFSGFEIAYSNPIENISVNLSAQFGSILLFPMVMQFGQAMWNELTINSGNETASSLQLQGTVEVINYALHSIQYLGNENFYGGDIIQVSAKNKNGMNSLGVPIFIDPVNDPPYIRVPNFIVLKSNEDETLIFDKEKDKFNFSIGDPDLPNFPGGQSNFMLTFSMEVNDGLLVTNLPSNLINTTEVKHKDSYQWQPLQTYVTISKHFMVKATGIRFQGTVNDCNGVMEQLFFHGGEHGGVLTLTLNDMGNHGCYPNCAEGMSMPLYTEATVILMRKQLMSSFVAHSLGSIIVIEFVVMFSLGVLLLYFTCKCAILLLHERRNRHKSMVASQQLKSSMPQTQHLSIL 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01122 1034 Gene3D Immunoglobulins 490 577 IPR013783 -
Aip04g01122 1034 Gene3D Immunoglobulins 104 217 IPR013783 -
Aip04g01122 1034 SUPERFAMILY E set domains 331 459 IPR014756 -
Aip04g01122 1034 Pfam Filamin/ABP280 repeat 488 568 IPR017868 -
Aip04g01122 1034 Pfam Filamin/ABP280 repeat 330 457 IPR017868 -
Aip04g01122 1034 ProSiteProfiles Filamin/ABP280 repeat profile. 510 572 IPR017868 -
Aip04g01122 1034 Gene3D Immunoglobulins 331 477 IPR013783 -
Aip04g01122 1034 Pfam Bacterial Ig domain 569 650 - -
Aip04g01122 1034 PANTHER JITTERBUG, ISOFORM N 166 962 IPR044801 GO:0030036|GO:0051015
Aip04g01122 1034 Gene3D - 578 662 - -
Aip04g01122 1034 SUPERFAMILY E set domains 494 575 IPR014756 -
Aip04g01122 1034 PANTHER JITTERBUG, ISOFORM N 166 962 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01122 Aip-Chr4 17046067 17051622 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01122 - - ccaj:109808168 1592.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01122 04 17046067 17051622 Aip04g01122 04 17046067 17051622 ECH