Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01119 ATGACAAAAGATGCCTCGGAACCGGGTGGAAGTGGGGGTGGTGGCTTCCACGCGGTTCACGCGGAGCGTGACCTAGAGTCAAATTGGGAAGTTGACCTCGCCAAGAAACTCGAGGAGTATCTGCTGAAAATTTGCTCCGGGGAGATCACCGGCGAAGAGGAAGGACACATTCCAGTGAATTTTGCAGAAGCTGCTCTACTGCTTCAGGGTTCGATACAGGTGTATAGTAGAAAGGTGGAATATCTATATACTCTGGTGTTGCGTGCTTTAGAGTTCCTTTCACAGAAAAGACAGCAAGATCATATAGATGGAGGATCAGACCAACATGATGAGAGTGGTCCCTCTGCTATTACCAATGAAGAAAATGATCAATTCTGGTGCTCGGATGACATCCCAGTTGAAGAGAGGAATTCCTTGGATGACACTGCAGGCAAAGAAGTGAATTTGGACCACTTCATAAAACCCCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATACTGCTGGTGATGGTGGGGAATTGGAGTCATATCTGTTGTCCACCACAGACTTGTACCAGGATTTTATTCTGTTGGATACATCAGATGCTGTTGCAGTGGATGAGTTTCTAAAGGATAGCGAAGCCAATGCAGCCCAAAATGTTGCTAATAGAGGAGCTTCAACTCGTAAAAGCTTTCTTTCTCCTACAAGGAATTCTGAAGGAGGTGCTAACAAATCTTCAGTGGCAAAAAGTCAGCATGCTAATTCCAACTGTTCCCCTAAAGTTGATTGCCACTTTGACAACGATAATGTTCGGCCCAGTTCTCCCGTCTCTGGTGGTATTGATAATTGTGATTTTGGTTATAACATGGATGATGGATGCAATGCATTTAGGGATTCAGACAATTCAGATGTTGATGATGATGATCCATGGAAACCTTTGAATCCACATGAACCAGGCAACTTGAAGGTGAAGCCGTTTAGAAAAGTTAAAGGATTAAAGAAGAATGGAATTAATGTGAGACGACGAGTATCAATGAGCATTTTATTTCCACCTGCAAAATTACATGGTCCTATTAGTCCAGAGCTCATGGCAATGTGGGAGATGCAGCATCATGCCCACGAACAACAAAAAGATTCTACATCTCTTCCACTATATGAGAAGCTTAGGCAGTCTCTTATCAATGAGGGGAGTAAAACCGATGGAGAATTTTTCAATGCAGAAGCTGATAATGATGACCATGAATTTGATACTGGAAATCCTGATTTTGATATGCCAGAGAATGCATACATGGATGAAGATCTACCTCATAACAAAGAGAATGAAGTTAATGATGCTCATGCTGAGGGTGATGAAGATGTAGATAATGATGTTCCAAATTCTCAGGAAAGTTTAGAAGATCTCTGTCGCTCTCACCTGAATGCCCTTCTAGCTAGCATAGCTGAAACTGAGAAGCAAACAGAATTGGCCACTAGGGTTTCAACATGGAAACAAAGAATTGAGCACAGCTTGGAAGAAGAGGATTCCCGGCCACCATTTGATATTCATGAATATGGGGCGAGAATTTTGGACAAACTATCCCTTGAAGAAAGTAGTAGCTGTGTCCTATCCTTTTCTGATTTGGTTGAGGGACAAACAAAGTTCGATATTGCCCGAAGCTTTTCTTCTCTCCTTCAACTGGTGAACAATAGAGACGTGGACCTTCAAAGAAATGTCGACAATGGGAAACCTGTGTGCTACACGGCTGTTAACCCATTCCATGTTAGGCTCCTTAAGCATGACAAGGAACAGGAAGGCATGCAGTTTCGCTTGTCAAAAAAGAGACCAAAGTCTGCAACTAAAAAACCAGCTAAGAACAAAGATGGAAGGGGAAAGTCTCCCACCAATGGTTCATCAAGGGAATACGGACCAATGGGGATGTCACCACCGGCGAATTGCAAGATTTCCTCAAAGCTCAGAAAGGTTAGTGCTATAAAGCTATCTCCTGAATCCAAGAGGAGGCGTAGATCTCAGTACGTCGAACCAGTTAACTTGCATTCGGGACGGTGA 2034 0.4331 MTKDASEPGGSGGGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITGEEEGHIPVNFAEAALLLQGSIQVYSRKVEYLYTLVLRALEFLSQKRQQDHIDGGSDQHDESGPSAITNEENDQFWCSDDIPVEERNSLDDTAGKEVNLDHFIKPPANLVVLEGDCLDTAGDGGELESYLLSTTDLYQDFILLDTSDAVAVDEFLKDSEANAAQNVANRGASTRKSFLSPTRNSEGGANKSSVAKSQHANSNCSPKVDCHFDNDNVRPSSPVSGGIDNCDFGYNMDDGCNAFRDSDNSDVDDDDPWKPLNPHEPGNLKVKPFRKVKGLKKNGINVRRRVSMSILFPPAKLHGPISPELMAMWEMQHHAHEQQKDSTSLPLYEKLRQSLINEGSKTDGEFFNAEADNDDHEFDTGNPDFDMPENAYMDEDLPHNKENEVNDAHAEGDEDVDNDVPNSQESLEDLCRSHLNALLASIAETEKQTELATRVSTWKQRIEHSLEEEDSRPPFDIHEYGARILDKLSLEESSSCVLSFSDLVEGQTKFDIARSFSSLLQLVNNRDVDLQRNVDNGKPVCYTAVNPFHVRLLKHDKEQEGMQFRLSKKRPKSATKKPAKNKDGRGKSPTNGSSREYGPMGMSPPANCKISSKLRKVSAIKLSPESKRRRRSQYVEPVNLHSGR 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01119 677 MobiDBLite consensus disorder prediction 653 668 - -
Aip04g01119 677 MobiDBLite consensus disorder prediction 100 121 - -
Aip04g01119 677 Gene3D Structural maintenance of chromosome 1. Chain E 509 571 IPR023093 -
Aip04g01119 677 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 4 665 IPR031739 GO:0030261
Aip04g01119 677 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 305 596 IPR031737 -
Aip04g01119 677 MobiDBLite consensus disorder prediction 592 677 - -
Aip04g01119 677 MobiDBLite consensus disorder prediction 216 254 - -
Aip04g01119 677 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
Aip04g01119 677 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 154 304 IPR031719 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01119 K11490 - gmx:100786571 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01119 04 17003486 17008415 Aip04g01119 04 17003486 17008415 ECH