Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01116 ATGGCCGTGAATACATCGGAGCTTGTTGCCAAGCTCACCCCGGAAACTCAACACTTCAGCCTTGACTCTCTTCTCCGCTTTTGTACCTCCAACGTTTCTGGGTTTCCTCCTTCACCCTCCCATTTCAATGTCTCACAGTTTGGGCATGGACAGTCCAATCCAACGTACCTGATCGAAGTTGGTTCTGTGGGGTCACCTTTGAAACGATATGTTCTCAGAAAGAAGCCTCCAGGGAAATTGCTGGCGTCAGCTCATGCGGTCGACAGAGAATTTCAGGTTCTTAAAGCGTTAGGCACTCATACTCAAGTTCCAGTTCCTAAAGTTTTCTGCTTGTGCGATGATCCAAATGTTATTGGAACAACATTTTATATCATGGAGTTTTTGGAGGGGCGTATATTTATTGACCCCAAGCTACCGGGTGTGGCACCGGCGAGGAAAAGGGCAATATACCTGGAAACTGCTAAAACCTTAGCTTCCTTACATTCTGCCAATGTGGACTCCATTGGTTTGGGAAAATATGGGCGGCGAAATGATTATTGTAAAAGACAGATTGAGAGGTGGGCTAAGCAATATGTTGCCTCAACTAGTGAGGGGAAACCTGCAAGAAATCCGAGAATGTTTGAACTGATTGATTGGCTACAACATCACATACCACCTGAAGATTCCTCAGGAGCAACAGCTGGCTTGGTTCATGGAGATTTTCGTGTGGACAATCTGGTATTCCACCCCACTGAGGATCGAGTAATTGGTGTACTTGACTGGGAACTTTCTACCCTTGGTAACCAAATGTGTGATGTTGCATATAGCTGTATGTCGTACATTGCAGATATTGGGCCTGACAAAGTACGAGAAGGCATGGAACGTGGATTACCAGAGGGAATTCCTTCACTGCCGGAATATTTGGCTGAATACTGCTCAGTGGCAGGAAGAAAATGGCCCATTGCTGAGTGGAGGTTCTATGTTGCCTTTTCTTTCTTTCGAGGGGCTTCAATTTTTGCGGGAGTATATAGCAGATGGGTTAAGGGTAATGCATCAGGAGGTGAGCGTGCTCGACACGCAGGGGTACTTGCAGATGGTCTTATAGATGCTGCTTGGAACTTTATCGAACAGAAATCTGTACTTCCTCAGCATCCTCCATCCGATGTGAATGCACAAGCCCATTCAAAAGAGTTGGTGGAAGGGAACGACATGCAGGGCCTATCAAGTGGGGGGAAGTTTGTTCCTAGTCAAAAGATTTTGACATTAAGGAACAAACTAATCAAGTTCATGGAGGAACATATATACCCCATGGAAAATGAATTCAACAAACTCGCCCAGTCAGAATCACGTTGGACTATTCATCCGGCTGAGGAGAAGTTAAAGGAGATCGCAAAGAAAGAAGGCTTGTGGAACTTATGGATTCCTCGCGATAGTGCTGTAAGGGCAAAAAATATACTCTTTGGTGGGAGAAATAGTGATCTCTCCAGTGATGCAAATGACTTGTTATTGGGTGCTGGTCTCACAAATCTGGAATATGGATACCTTTGTGAGATTATGGGTCGTTCTGTTTGGGCCCCACAAGTATTTAACTGTGGTGCACCTGACACAGGTAATATGGAGGTGTTACTTCGCTATGGAAACAAAGAACAAATGCAAGAATGGCTTATTCCTTTGCTTGAGGGGAAGATTAGATCTGGATTTGCTATGACAGAACCACGTGTTGCGTCTTCTGATGCAACGAACATTGAGTGTTCTATCAAAAGACAAGGAGATTCATATATTATCAATGGGACAAAATGGTGGACAAGTGGCGCTATGGATCCCCGATGCAGAATTCTCATAGTCATGGGGAAAACTGACTTCAATGCAGCAAAGCATAAACAGCAATCTATGACCTTAGTGGACACCCAGACTCCTGGTGTTCGAATAAAGAGACCCTTAATGGTGTTTGGATTCGATGATGCACCGCATGGACACGCCGAAGTAACATTCGAAAATGTTCGTGTGCCAGCAGAAAATATTATACTCGGAGAAGGACGTGGATTTGAGATTGCTCAAGGTAGGCTAGGTCCAGGAAGGCTGCACCATTGCATGAGACTGATAGGCGCTGCCGAGCGAGGAATGCTTTTGATGGCTCAAAGAGCTCTTAATAGAAGAACATTTGGGAAGTTGATTGCTCAACATGGTTCATTTCTTTCAGATATGGCAAAGTGCCGTATAGAGCTCGAAAAGACCAGATTGTTGGTGTTAGAAGCAGCTGACCAGCTTGATAAGCATGGAAACAAAAAAGCTAGAGGGATACTAGCAATGGCCAAGGTAGCCGCACCAAACATGGCGCTGAAGGTGCTTGACATGGCCATTCAAGTGCATGGAGCAGCTGGTGTGTCGTCTGACACAGTCCTATCACAACTGTGGGCCGCCGCACGGACGCTGAGAATTGCTGATGGTCCGGATGAAGTACACTTGGGTACCATTGCCAAGTTAGAACTTCAAAGAGCCAAGCTTTGA 2487 0.4552 MAVNTSELVAKLTPETQHFSLDSLLRFCTSNVSGFPPSPSHFNVSQFGHGQSNPTYLIEVGSVGSPLKRYVLRKKPPGKLLASAHAVDREFQVLKALGTHTQVPVPKVFCLCDDPNVIGTTFYIMEFLEGRIFIDPKLPGVAPARKRAIYLETAKTLASLHSANVDSIGLGKYGRRNDYCKRQIERWAKQYVASTSEGKPARNPRMFELIDWLQHHIPPEDSSGATAGLVHGDFRVDNLVFHPTEDRVIGVLDWELSTLGNQMCDVAYSCMSYIADIGPDKVREGMERGLPEGIPSLPEYLAEYCSVAGRKWPIAEWRFYVAFSFFRGASIFAGVYSRWVKGNASGGERARHAGVLADGLIDAAWNFIEQKSVLPQHPPSDVNAQAHSKELVEGNDMQGLSSGGKFVPSQKILTLRNKLIKFMEEHIYPMENEFNKLAQSESRWTIHPAEEKLKEIAKKEGLWNLWIPRDSAVRAKNILFGGRNSDLSSDANDLLLGAGLTNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQMQEWLIPLLEGKIRSGFAMTEPRVASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRILIVMGKTDFNAAKHKQQSMTLVDTQTPGVRIKRPLMVFGFDDAPHGHAEVTFENVRVPAENIILGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMLLMAQRALNRRTFGKLIAQHGSFLSDMAKCRIELEKTRLLVLEAADQLDKHGNKKARGILAMAKVAAPNMALKVLDMAIQVHGAAGVSSDTVLSQLWAAARTLRIADGPDEVHLGTIAKLELQRAKL 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01116 828 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 1 828 - -
Aip04g01116 828 SUPERFAMILY Protein kinase-like (PK-like) 39 343 IPR011009 -
Aip04g01116 828 Gene3D Phosphorylase Kinase; domain 1 21 129 - -
Aip04g01116 828 CDD ACAD10_11_N-like 43 308 IPR041726 -
Aip04g01116 828 Pfam Phosphotransferase enzyme family 44 289 IPR002575 -
Aip04g01116 828 Pfam Acyl-CoA dehydrogenase, C-terminal domain 672 820 IPR009075 GO:0016627
Aip04g01116 828 Gene3D - 408 556 IPR037069 GO:0016627|GO:0050660
Aip04g01116 828 Gene3D - 558 672 IPR046373 GO:0016627
Aip04g01116 828 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 407 685 IPR009100 GO:0016627
Aip04g01116 828 PANTHER ACYL-COA DEHYDROGENASE IBR3-RELATED 1 828 - -
Aip04g01116 828 Gene3D - 673 827 - -
Aip04g01116 828 Pfam Acyl-CoA dehydrogenase, N-terminal domain 414 555 IPR013786 GO:0016627|GO:0050660
Aip04g01116 828 Gene3D - 130 372 - -
Aip04g01116 828 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 670 824 IPR036250 GO:0016627
Aip04g01116 828 Pfam Acyl-CoA dehydrogenase, middle domain 559 660 IPR006091 GO:0016627
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01116 1 826 Acyl Lipid Metabolism Gene Families AT3G06810 75.510 0.0 1300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01116 K00249 - gmx:100778771 1446.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01116 04 16965658 16971917 Aip04g01116 04 16965658 16971917 ECH