Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01067 ATGGGTATCTTTACACACGAATTTGCTACTCCATCTTCTGTGGCTCCTGCTAGGCTTTACAAAGCTATGGCATTAGATTTTCATAATCTCTTCCCAAAGATTGTAGATTCTATTCAGTGTGTTGAAACAATTGAAGGAAATGGTGCTGCTGGAACAATAAAGAAGATCACCTTGGTTGAAGGTGGGAAAAGCAGGTATGTATTGCACAAAGTTGAAGAAGTTGATGAGGCCAAATGGGTATACAACTACAGCATAATTGGGGGTGTAGGGTTACCAGAAACATGGGAGAAGATCTCATTTGAGACCATAGTAATGGAAGGTCCAAAAGAGGAAGGAGGATCCATTAGGAAGGTGAACATAAAGTATTTCACCAAAGGAGATGCTGAGGTGTGTGATGAAGTGCTCAAGAGTAACCAAAGCAGGGCTGAAGGCCTTCTCAAGTTCATTGAGGCTTACCTTCTTGCAAATCCTCATTATGTATAA 483 0.4099 MGIFTHEFATPSSVAPARLYKAMALDFHNLFPKIVDSIQCVETIEGNGAAGTIKKITLVEGGKSRYVLHKVEEVDEAKWVYNYSIIGGVGLPETWEKISFETIVMEGPKEEGGSIRKVNIKYFTKGDAEVCDEVLKSNQSRAEGLLKFIEAYLLANPHYV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01067 160 CDD Bet_v1-like 4 153 - -
Aip04g01067 160 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01067 160 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01067 160 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01067 160 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01067 160 PRINTS Major pollen allergen Bet V1 signature 111 127 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01067 160 PRINTS Major pollen allergen Bet V1 signature 145 155 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01067 160 SUPERFAMILY Bet v1-like 2 159 - -
Aip04g01067 160 PANTHER - 1 159 - -
Aip04g01067 160 Pfam Pathogenesis-related protein Bet v 1 family 4 156 IPR000916 GO:0006952
Aip04g01067 160 Gene3D - 2 160 IPR023393 -
Aip04g01067 160 PANTHER PATHOGENESIS-RELATED PROTEIN 10 1 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01067 Aip-Chr4 15588192 15590868 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01067 - - adu:107483504 295.434